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Clique ID Contributing Species (Count) Clique Type Intra-Clique ANI Intra-Clique AF
1324Candidatus Koribacter versatilis(1) singleton
55Acinetobacter baylyi(2) clique99.990.94
783Alcanivorax sp.(2) Alcanivorax borkumensis(1) clique1000.97
2416Alkalilimnicola ehrlichei(1) singleton
2853Anaeromyxobacter dehalogenans(1) singleton
829Anaplasma marginale(11) clique group99.410.8
618Anaplasma phagocytophilum(4) clique99.90.93
1915Aquifex aeolicus(1) singleton
2077Candidatus Phytoplasma unclassified(1) singleton
4300Aromatoleum aromaticum(1) singleton
507Bacillus sp.(1) Bacillus cereus(12) Bacillus thuringiensis(6) Bacillus anthracis(26) clique98.670.84
807Bacillus cereus(3) clique98.280.83
80Bacillus sp.(1) Bacillus cereus(49) Bacillus thuringiensis(20) clique group970.77
1784Bacillus clausii(1) singleton
2605Bacillus halodurans(1) singleton
46Bacteroides sp.(3) Bacteroides fragilis(9) clique99.010.82
834Bacteroides sp.(2) Bacteroides thetaiotaomicron(8) clique98.440.8
2674Bartonella henselae(1) singleton
1Bartonella quintana(2) clique990.91
2744Baumannia cicadellinicola(1) singleton
4665Bdellovibrio bacteriovorus(1) singleton
1002Bifidobacterium sp.(1) Bifidobacterium longum(17) clique group98.120.78
247Bordetella pertussis(7) Bordetella parapertussis(1) Bordetella bronchiseptica(4) clique99.350.78
832Borrelia sp.(1) Borrelia burgdorferi(16) clique group98.960.75
997Bradyrhizobium japonicum(2) clique98.840.88
91Brucella neotomae(1) Brucella microti(1) Brucella canis(10) Brucella abortus(101) Brucella sp.(16) Brucella melitensis(52) Brucella suis(33) Brucella pinnipedialis(4) Brucella ovis(15) Brucella ceti(5) clique99.770.94
10Buchnera aphidicola(8) clique99.820.86
2395Buchnera aphidicola(1) singleton
887Burkholderia cenocepacia(4) clique98.530.81
258Burkholderia cepacia(1) Burkholderia ambifaria(3) clique group96.940.77
890Burkholderia pseudomallei(53) Burkholderia mallei(10) clique group99.650.8
1542Burkholderia cepacia(1) singleton
555Burkholderia thailandensis(5) clique99.420.84
2109Burkholderia xenovorans(1) singleton
86Campylobacter jejuni(84) clique group98.320.86
4768Candidatus Blochmannia floridanus(1) singleton
213Candidatus Blochmannia chromaiodes(1) Candidatus Blochmannia pennsylvanicus(1) clique98.631
881Candidatus Pelagibacter ubique(5) clique97.650.89
3922Candidatus Protochlamydia amoebophila(1) singleton
767Carboxydothermus ferrireducens(1) Carboxydothermus hydrogenoformans(1) clique97.890.86
134Caulobacter crescentus(2) clique1000.97
164Chlamydia muridarum(4) clique99.380.95
326Chlamydia trachomatis(48) clique99.470.96
97Chlamydophila abortus(2) clique99.650.97
3182Chlamydophila caviae(1) singleton
1918Chlamydophila felis(1) singleton
661Chlamydophila pneumoniae(5) clique99.690.95
2240Chlorobium chlorochromatii(1) singleton
2859Chlorobium tepidum(1) singleton
4743Chromobacterium violaceum(1) singleton
1587Chromohalobacter salexigens(1) singleton
553Clostridium acetobutylicum(3) clique99.990.98
549Clostridium perfringens(10) clique98.290.76
145Clostridium tetani(2) clique99.340.87
4078Colwellia psychrerythraea(1) singleton
749Corynebacterium diphtheriae(17) clique98.480.87
450Corynebacterium jeikeium(2) clique96.840.89
863Coxiella burnetii(7) clique99.730.81
2324Cytophaga hutchinsonii(1) singleton
3462Dechloromonas aromatica(1) singleton
2747Dehalococcoides ethenogenes(1) singleton
297Dehalococcoides mccartyi(5) clique99.030.84
4073Deinococcus radiodurans(1) singleton
342Desulfitobacterium hafniense(6) Desulfitobacterium sp.(1) clique97.930.8
3440Desulfotalea psychrophila(1) singleton
873Desulfovibrio alaskensis(2) clique99.480.86
49Desulfovibrio vulgaris(2) clique99.040.87
4615Ehrlichia canis(1) singleton
728Ehrlichia chaffeensis(2) clique99.750.73
88Enterococcus faecium(1) Enterococcus faecalis(99) Enterococcus sp.(1) clique group98.940.82
279Pectobacterium atrosepticum(2) clique98.910.91
4278Erythrobacter litoralis(1) singleton
1014Shigella sonnei(6) Escherichia sp.(4) Shigella dysenteriae(4) Escherichia coli(1238) Shigella sp.(1) Shigella flexneri(24) Shigella boydii(7) clique group97.860.79
561Francisella tularensis(55) Francisella novicida(3) clique99.270.86
2032Frankia alni(1) singleton
3590Frankia sp.(1) singleton
33Fusobacterium nucleatum(3) clique98.860.88
586Geobacillus thermocatenulatus(1) Geobacillus kaustophilus(1) Geobacillus sp.(4) clique group97.140.82
3330Geobacter metallireducens(1) singleton
700Geobacter sulfurreducens(2) clique99.360.92
2780Gloeobacter violaceus(1) singleton
4904Gluconobacter oxydans(1) singleton
2251Granulibacter bethesdensis(1) singleton
551Haemophilus ducreyi(5) clique98.660.87
554Haemophilus aegyptius(1) Haemophilus influenzae(18) clique97.230.82
459Histophilus somni(2) clique98.10.77
4080Hahella chejuensis(1) singleton
336Haloquadratum walsbyi(2) clique98.590.8
4691Helicobacter acinonychis(1) singleton
1047Helicobacter hepaticus(1) singleton
867Helicobacter pylori(5) clique99.990.95
1647Helicobacter pylori(1) singleton
883Helicobacter pylori(122) clique group96.720.89
3865Hyphomonas neptunium(1) singleton
323Idiomarina loihiensis(2) clique1000.99
2543Jannaschia sp.(1) singleton
979Lactobacillus acidophilus(2) clique99.960.93
546Lactobacillus delbrueckii(10) clique98.570.78
95Lactobacillus johnsonii(5) clique group96.990.79
75Lactobacillus plantarum(8) Lactobacillus sp.(1) clique99.150.86
578Lactobacillus sakei(2) clique97.390.85
288Lactobacillus salivarius(6) clique97.710.78
569Lactococcus lactis(6) clique99.10.8
671Lawsonia intracellularis(2) clique1000.98
303Legionella pneumophila(12) clique97.490.87
4083Leifsonia xyli(1) singleton
627Leptospira kirschneri(1) Leptospira interrogans(193) Leptospira santarosai(1) clique99.450.9
621Listeria innocua(4) clique97.680.75
320Listeria monocytogenes(18) clique98.950.87
476Listeria monocytogenes(17) clique group99.520.87
2222Magnetospirillum magneticum(1) singleton
3535Basfia succiniciproducens(1) singleton
1278Maricaulis maris(1) singleton
1179Mesoplasma florum(1) singleton
446Mesorhizobium loti(2) clique98.650.8
4536Chelativorans sp.(1) singleton
1349Methanococcoides burtonii(1) singleton
3032Methanosarcina barkeri(1) singleton
1941Methanosphaera stadtmanae(1) singleton
1664Methanospirillum hungatei(1) singleton
2487Methylobacillus flagellatus(1) singleton
778Methylococcus capsulatus(3) clique99.290.94
2066Moorella thermoacetica(1) singleton
859Mycobacterium avium(25) clique99.680.87
211Mycobacterium tuberculosis(77) Mycobacterium bovis(9) Mycobacterium africanum(1) Mycobacterium sp.(59) Mycobacterium canettii(5) Mycobacterium orygis(1) clique group99.860.91
4218Mycobacterium leprae(1) singleton
338Mycobacterium sp.(3) clique99.280.9
892Mycoplasma capricolum(2) clique97.40.79
799Mycoplasma gallisepticum(13) clique99.040.9
580Mycoplasma genitalium(5) clique99.620.89
860Mycoplasma hyopneumoniae(6) clique98.820.88
1970Mycoplasma mobile(1) singleton
1007Mycoplasma mycoides(2) clique99.970.89
1385Mycoplasma penetrans(1) singleton
534Mycoplasma pneumoniae(7) clique99.870.89
2641Mycoplasma pulmonis(1) singleton
527Mycoplasma synoviae(2) Mycoplasma arginini(1) clique99.560.89
966Myxococcus xanthus(2) Myxococcus Xanthus(1) clique99.990.97
3985Natronomonas pharaonis(1) singleton
536Neisseria gonorrhoeae(16) clique99.590.92
78Neisseria meningitidis(184) clique97.70.88
1429Neorickettsia sennetsu(1) singleton
3765Nitrobacter hamburgensis(1) singleton
1613Nitrobacter winogradskyi(1) singleton
214Nitrosococcus oceani(2) clique99.990.93
4222Nitrosomonas europaea(1) singleton
2145Nitrosomonas eutropha(1) singleton
4924Nitrosospira multiformis(1) singleton
2456Nocardia farcinica(1) singleton
4096Nostoc sp.(1) singleton
1709Oceanobacillus iheyensis(1) singleton
4945Candidatus Phytoplasma unclassified(1) singleton
259Pasteurella sp.(5) Pasteurella multocida(7) clique98.820.84
2207Pelobacter carbinolicus(1) singleton
4236Pelodictyon luteolum(1) singleton
2501Photobacterium profundum(1) singleton
4799Photorhabdus luminescens(1) singleton
1840Polaromonas sp.(1) singleton
25Porphyromonas gingivalis(9) clique98.850.86
1518Prochlorococcus marinus(1) singleton
3734Prochlorococcus marinus(1) singleton
3322Prochlorococcus marinus(1) singleton
4455Prochlorococcus marinus(1) singleton
2884Prochlorococcus marinus(1) singleton
254Propionibacterium sp.(4) Propionibacterium acnes(79) clique99.190.93
3592Pseudoalteromonas atlantica(1) singleton
1985Pseudoalteromonas haloplanktis(1) singleton
89Pseudomonas sp.(3) Acidovorax soli(1) Pseudomonas aeruginosa(45) clique99.170.87
1067Pseudomonas entomophila(1) singleton
43Pseudomonas fluorescens(2) clique98.880.92
2454Pseudomonas fluorescens(1) singleton
585Pseudomonas putida(11) clique97.820.81
866Pseudomonas savastanoi(1) Pseudomonas syringae(28) clique group98.520.81
62Pseudomonas syringae(8) clique98.810.86
1886Psychrobacter arcticus(1) singleton
811Psychrobacter sp.(1) Psychrobacter cryohalolentis(1) clique97.020.88
4803Cupriavidus necator(1) singleton
331Cupriavidus metallidurans(2) clique96.960.8
11Ralstonia solanacearum(5) clique99.350.82
648Rhodococcus sp.(2) Rhodococcus jostii(1) clique98.890.75
4855Rhodoferax ferrireducens(1) singleton
99Rhodopirellula baltica(3) clique97.330.84
3437Rhodopseudomonas palustris(1) singleton
1105Rhodopseudomonas palustris(1) singleton
864Rhodopseudomonas palustris(2) clique97.970.87
1812Rhodopseudomonas palustris(1) singleton
4713Rhodospirillum rubrum(1) singleton
1013Rickettsia bellii(2) clique99.780.88
227Rickettsia rhipicephali(1) Rickettsia sibirica(2) Rickettsia montanensis(1) Rickettsia conorii(2) Rickettsia japonica(1) Rickettsia massiliae(2) Rickettsia honei(1) Rickettsia philipii(1) Rickettsia africae(1) Rickettsia slovaca(2) Rickettsia heilongjiangensis(1) Candidatus Rickettsia amblyommii(1) Rickettsia rickettsii(8) Rickettsia peacockii(1) Rickettsia parkeri(1) clique98.750.87
4067Rickettsia felis(1) singleton
857Rickettsia prowazekii(6) Rickettsia rickettsii(6) clique99.950.96
28Rickettsia typhi(3) clique99.990.97
3242Rubrobacter xylanophilus(1) singleton
1080Saccharophagus degradans(1) singleton
965Salinibacter ruber(2) clique98.790.88
876Salmonella enterica(335) clique98.960.87
3093Shewanella oneidensis(1) singleton
675Shewanella sp.(2) clique97.070.91
2860Ruegeria pomeroyi(1) singleton
4787Ruegeria sp.(1) singleton
61Ensifer meliloti(18) Sinorhizobium meliloti(6) clique99.110.82
2767Sphingopyxis alaskensis(1) singleton
877Staphylococcus epidermidis(1) Staphylococcus aureus(236) Staphylococcus sp.(1) clique98.620.88
317Staphylococcus epidermidis(89) Staphylococcus aureus(2) Staphylococcus Epidermidis(1) clique98.730.87
717Staphylococcus saprophyticus(2) clique99.210.89
325Streptococcus agalactiae(254) clique99.250.85
242Streptococcus mutans(86) clique99.410.93
798Streptococcus pneumoniae(261) Streptococcus unclassified(1) clique98.740.85
868Streptococcus pyogenes(31) clique98.850.85
15Streptococcus thermophilus(7) clique group99.210.77
2332Streptomyces avermitilis(1) singleton
668Streptomyces coelicolor(1) Streptomyces lividans(1) clique99.460.82
2729Symbiobacterium thermophilum(1) singleton
898Synechococcus elongatus(2) clique99.930.96
3534Prochlorococcus sp.(1) singleton
2613Prochlorococcus sp.(1) singleton
3848Prochlorococcus sp.(1) singleton
1355Synechococcus sp.(1) singleton
3516Synechococcus sp.(1) singleton
1776Prochlorococcus sp.(1) singleton
497Synechocystis sp.(6) clique1000.96
3949Syntrophomonas wolfei(1) singleton
1479Syntrophus aciditrophicus(1) singleton
4633Caldanaerobacter subterraneus(1) singleton
478Thermobifida fusca(2) clique99.90.94
3012Thermosynechococcus elongatus(1) singleton
20Thermotoga sp.(1) Thermotoga maritima(3) clique98.550.94
817Thermus thermophilus(5) Thermus sp.(1) clique group97.010.78
2752Thiobacillus denitrificans(1) singleton
3159Thiomicrospira crunogena(1) singleton
1478Sulfurimonas denitrificans(1) singleton
797Treponema denticola(11) clique97.340.86
612Treponema paraluiscuniculi(1) Treponema pallidum(11) clique99.780.91
135Tropheryma whipplei(2) clique99.660.94
542Ureaplasma parvum(5) clique99.520.89
241Vibrio albensis(1) Vibrio cholerae(162) clique group98.820.89
2343Vibrio fischeri(1) singleton
314Vibrio parahaemolyticus(19) clique98.850.87
281Vibrio vulnificus(10) clique group96.850.83
2814Wigglesworthia glossinidia(1) singleton
223Wolbachia endosymbiont(1) Wolbachia sp.(2) clique97.490.81
2669Wolbachia unclassified(1) singleton
3301Wolinella succinogenes(1) singleton
77Xanthomonas citri(3) Xanthomonas fuscans(3) Xanthomonas axonopodis(6) clique98.120.84
40Xanthomonas campestris(9) clique98.590.91
982Xanthomonas sp.(1) Xanthomonas perforans(1) Xanthomonas axonopodis(1) Xanthomonas campestris(1) clique99.050.87
17Xanthomonas oryzae(7) clique98.460.78
550Xylella fastidiosa(11) clique98.220.83
76Yersinia pseudotuberculosis(9) Yersinia pestis(99) clique99.890.9
109Zymomonas mobilis(5) clique98.930.9
1006Archaeoglobus fulgidus(2) clique99.50.89
581Haloarcula marismortui(1) Haloarcula californiae(2) Haloarcula sinaiiensis(2) clique98.580.85
738Halobacterium sp.(1) Halobacterium salinarum(1) clique99.990.92
3458Methanocaldococcus jannaschii(1) singleton
2460Methanopyrus kandleri(1) singleton
3089Methanosarcina acetivorans(1) singleton
174Methanosarcina mazei(2) clique99.030.79
1088Methanothermobacter thermautotrophicus(1) singleton
1272Picrophilus torridus(1) singleton
3208Pyrobaculum aerophilum(1) singleton
1869Pyrococcus abyssi(1) singleton
710Pyrococcus furiosus(2) clique99.980.96
695Sulfolobus acidocaldarius(3) clique1000.96
267Sulfolobus solfataricus(3) clique99.460.81
4588Sulfolobus tokodaii(1) singleton
4634Thermococcus kodakarensis(1) singleton
2941Thermoplasma acidophilum(1) singleton
4074Thermoplasma volcanium(1) singleton
562Actinobacillus pleuropneumoniae(16) clique98.390.9
2946Aurantimonas manganoxydans(1) singleton
250Bacillus cereus(2) Bacillus thuringiensis(1) clique97.950.81
809Bacillus sp.(2) clique1000.92
3296Blastopirellula marina(1) singleton
4660Brevibacterium linens(1) singleton
1528Burkholderia dolosa(1) singleton
856Campylobacter coli(45) Campylobacter sp.(1) clique group98.70.86
645Campylobacter upsaliensis(2) clique96.780.82
3543Dokdonia donghaensis(1) singleton
4282Chlorobium ferrooxidans(1) singleton
301Clostridium difficile(109) Clostridium sp.(89) clique99.280.89
558Crocosphaera watsonii(5) clique99.640.7
3082Desulfuromonas acetoxidans(1) singleton
598Enterococcus faecium(87) Enterococcus durans(1) Enterococcus sp.(5) clique99.40.81
4910Erythrobacter sp.(1) singleton
1628Ferroplasma acidarmanus(1) singleton
3894unclassified(1) singleton
858Fusobacterium nucleatum(3) Fusobacterium sp.(4) clique98.040.8
3213Idiomarina baltica(1) singleton
1431Janibacter sp.(1) singleton
3109Leeuwenhoekiella blandensis(1) singleton
2772Loktanella vestfoldensis(1) singleton
3250Marinomonas sp.(1) singleton
4044Nitrobacter sp.(1) singleton
2281Nitrococcus mobilis(1) singleton
2983Oceanicaulis alexandrii(1) singleton
1307Oceanicola batsensis(1) singleton
3058Oceanicola granulosus(1) singleton
1339Bermanella marisrubri(1) singleton
4605Neptuniibacter caesariensis(1) singleton
2101Photobacterium sp.(1) singleton
4687Polaribacter irgensii(1) singleton
1668Pseudoalteromonas tunicata(1) singleton
4470Psychroflexus torquis(1) singleton
930Ralstonia solanacearum(3) clique98.180.76
1989Reinekea sp.(1) singleton
4345Rickettsiella grylli(1) singleton
2647Roseobacter sp.(1) singleton
4290Roseovarius nubinhibens(1) singleton
2442Roseovarius sp.(1) singleton
3307unclassified(1) singleton
632Streptococcus sp.(1) Streptococcus suis(63) clique group96.890.8
514Sulfitobacter sp.(2) clique97.290.81
4745Synechococcus sp.(1) singleton
2938Synechococcus sp.(1) singleton
4311Synechococcus sp.(1) singleton
2935Polaribacter sp.(1) singleton
843Vibrio alginolyticus(2) Vibrio sp.(1) clique98.490.84
1862Photobacterium angustum(1) singleton
175Vibrio splendidus(1) Vibrio sp.(1) Vibrio tasmaniensis(3) clique97.050.83
231Vibrio splendidus(9) clique970.84
3605Wolbachia unclassified(1) singleton
1933Wolbachia endosymbiont(1) singleton
4448Yersinia bercovieri(1) singleton
2765Yersinia frederiksenii(1) singleton
4128Yersinia intermedia(1) singleton
1749Yersinia mollaretii(1) singleton
2182unclassified(1) singleton
4034Agreia sp.(1) singleton
2302unclassified(1) singleton
844Agrobacterium tumefaciens(2) Agrobacterium sp.(1) clique98.460.87
813Bacillus sp.(1) Bacillus licheniformis(6) clique99.670.92
53Corynebacterium glutamicum(10) Corynebacterium crenatum(1) clique98.50.89
4696Rhodopseudomonas palustris(1) singleton
3166Acidothermus cellulolyticus(1) singleton
1796Acidovorax avenae(1) singleton
955Acidovorax sp.(1) Acidovorax ebreus(1) clique97.70.71
909Aeromonas hydrophila(3) clique97.020.87
161Arthrobacter aurescens(1) Arthrobacter nitroguajacolicus(1) clique98.930.82
2883Arthrobacter sp.(1) singleton
4574Azoarcus sp.(1) singleton
1001Bartonella bacilliformis(2) clique1000.96
765Bifidobacterium adolescentis(2) clique97.720.73
1164Buchnera aphidicola(1) singleton
662Campylobacter fetus(2) clique99.850.88
1213Candidatus Ruthia magnifica(1) singleton
2587Chlorobium phaeobacteroides(1) singleton
1593Clostridium novyi(1) singleton
2444Gramella forsetii(1) singleton
3739Halorhodospira halophila(1) singleton
729Lactobacillus brevis(4) clique97.890.84
615Lactobacillus paracasei(10) Lactobacillus casei(22) Lactobacillus sp.(1) clique98.740.8
733Lactobacillus gasseri(7) clique99.370.84
54Lactococcus lactis(6) clique98.50.8
489unclassified(1) Leptospira borgpetersenii(16) clique99.290.88
848Leuconostoc mesenteroides(3) clique98.920.74
2529Listeria welshimeri(1) singleton
1747Magnetococcus sp.(1) singleton
968Marinobacter aquaeolei(1) Marinobacter hydrocarbonoclasticus(1) clique96.820.73
4119Methanosaeta thermophila(1) singleton
219Mycobacterium smegmatis(3) clique98.780.9
4243Mycobacterium vanbaalenii(1) singleton
4796Nocardioides sp.(1) singleton
511Oenococcus oeni(15) clique99.520.9
3382Paracoccus denitrificans(1) singleton
182Pediococcus pentosaceus(2) clique98.910.85
4626Pelobacter propionicus(1) singleton
2845Polaromonas naphthalenivorans(1) singleton
1895Psychromonas ingrahamii(1) singleton
3193Pyrobaculum islandicum(1) singleton
416Rhizobium leguminosarum(2) clique98.840.88
3981Roseobacter denitrificans(1) singleton
1662Shewanella sp.(1) singleton
411Shewanella putrefaciens(2) Shewanella sp.(1) clique98.750.84
2745Candidatus Solibacter usitatus(1) singleton
1954Syntrophobacter fumaroxidans(1) singleton
3198Thermofilum pendens(1) singleton
2364Verminephrobacter eiseniae(1) singleton
169Stigmatella aurantiaca(2) clique99.990.87
3447Fulvimarina pelagi(1) singleton
588Mariprofundus ferrooxydans(2) clique98.070.82
2478Synechococcus sp.(1) singleton
1676Synechococcus sp.(1) singleton
4882Labrenzia aggregata(1) singleton
1215unclassified(1) singleton
691Pseudoalteromonas marina(1) Pseudoalteromonas sp.(2) clique97.820.87
4039unclassified(1) singleton
3273Lyngbya sp.(1) singleton
1980unclassified(1) singleton
837Nodularia spumigena(2) clique99.990.94
630Acinetobacter unclassified(4) Acinetobacter baumannii(235) Acinetobacter sp.(4) unclassified(1) Acinetobacter calcoaceticus(1) clique98.240.84
775Burkholderia sp.(1) Burkholderia vietnamiensis(1) clique99.180.68
870Clostridium thermocellum(6) clique99.850.88
3777Desulfotomaculum reducens(1) singleton
819Geobacillus thermodenitrificans(2) Geobacillus sp.(1) clique99.470.88
1878Herminiimonas arsenicoxydans(1) singleton
2144Hyperthermus butylicus(1) singleton
2631Methanococcus maripaludis(1) singleton
4828Methanocorpusculum labreanum(1) singleton
1094Methanoculleus marisnigri(1) singleton
3267Methylibium petroleiphilum(1) singleton
1317Prochlorococcus marinus(1) singleton
3000Prochlorococcus marinus(1) singleton
1262Prochlorococcus marinus(1) singleton
4593Prochlorococcus marinus(1) singleton
4045Pyrobaculum calidifontis(1) singleton
774Rhodobacter sphaeroides(5) Rhodobacter sp.(1) clique98.120.88
157Saccharopolyspora erythraea(2) clique99.990.93
268Shewanella baltica(8) clique97.420.84
4719Staphylothermus marinus(1) singleton
1285Streptococcus sanguinis(1) singleton
488Yersinia enterocolitica(15) clique group98.470.88
1814Thermosinus carboxydivorans(1) singleton
4247Microscilla marina(1) singleton
732Acidiphilium sp.(1) Acidiphilium multivorum(1) Acidiphilium cryptum(1) clique98.980.79
4029Bradyrhizobium sp.(1) singleton
3812Bradyrhizobium sp.(1) singleton
436Caldicellulosiruptor saccharolyticus(1) Caldicellulosiruptor sp.(1) clique96.580.75
1279Candidatus Vesicomyosocius okutanii(1) singleton
4887Clavibacter michiganensis(1) singleton
761Clostridium botulinum(14) clique group97.720.79
3222Dichelobacter nodosus(1) singleton
4416Enterobacter sp.(1) singleton
1899Geobacter uraniireducens(1) singleton
280Lactobacillus reuteri(7) Lactobacillus sp.(1) clique group97.260.81
4562Metallosphaera sedula(1) singleton
229Methanobrevibacter smithii(9) clique99.10.88
201Mycobacterium gilvum(2) clique98.540.86
3882Novosphingobium aromaticivorans(1) singleton
4555Orientia tsutsugamushi(1) singleton
2099Pelotomaculum thermopropionicum(1) singleton
4724Polynucleobacter necessarius(1) singleton
3067Chlorobium phaeovibrioides(1) singleton
967Pseudomonas mendocina(2) clique97.940.88
69Pseudomonas stutzeri(4) clique97.470.82
2480Psychrobacter sp.(1) singleton
1838Pyrobaculum arsenaticum(1) singleton
960Ralstonia eutropha(1) Ralstonia sp.(1) clique99.510.84
3576Rhizobium etli(1) singleton
1265Rhodobacter sphaeroides(1) singleton
3018Roseiflexus sp.(1) singleton
260Salinispora arenicola(1) Salinispora pacifica(2) Salinispora tropica(6) clique99.570.88
276unclassified(1) Sphingomonas wittichii(2) clique98.730.8
1427Synechococcus sp.(1) singleton
2252Prochlorococcus sp.(1) singleton
114Thermotoga petrophila(1) Thermotoga naphthophila(1) clique96.740.93
2336Bacillus sp.(1) singleton
4645Cyanothece sp.(1) singleton
2751Algoriphagus sp.(1) singleton
3094unclassified(1) singleton
1462unclassified(1) singleton
4292Marinobacter sp.(1) singleton
1934Collinsella aerofaciens(1) singleton
3575Sagittula stellata(1) singleton
4264Roseobacter sp.(1) singleton
2954Loktanella sp.(1) singleton
1398Actinobacillus succinogenes(1) singleton
4469Alkaliphilus metalliredigens(1) singleton
2775Anaeromyxobacter sp.(1) singleton
595Arcobacter butzleri(4) Arcobacter sp.(1) clique97.850.85
874Bacillus sp.(2) Bacillus amyloliquefaciens(11) Paenibacillus polymyxa(1) Paenibacillus sp.(1) Bacillus subtilis(1) clique98.380.88
1126Bacillus cereus(1) singleton
2835Bacillus pumilus(1) singleton
762Bacteroides sp.(2) Bacteroides vulgatus(6) clique98.920.75
2434Campylobacter concisus(1) singleton
484Campylobacter curvus(1) Campylobacter sp.(1) clique97.860.86
2877Campylobacter hominis(1) singleton
1768Candidatus Methanoregula boonei(1) singleton
3500Citrobacter koseri(1) singleton
29Clostridium diolis(1) Clostridium beijerinckii(2) clique97.740.85
141Clostridium kluyveri(2) clique1000.95
756Cronobacter sakazakii(9) clique98.410.85
1939Fervidobacterium nodosum(1) singleton
3584Flavobacterium psychrophilum(1) singleton
3160Ignicoccus hospitalis(1) singleton
4721Janthinobacterium sp.(1) singleton
3889Kineococcus radiotolerans(1) singleton
84Klebsiella sp.(5) Klebsiella pneumoniae(106) clique group99.520.88
3456Marinomonas sp.(1) singleton
1788Methanococcus aeolicus(1) singleton
4720Methanococcus maripaludis(1) singleton
3086Methanococcus vannielii(1) singleton
4404Nitratiruptor sp.(1) singleton
822Ochrobactrum anthropi(3) clique98.070.82
311Parabacteroides sp.(1) Bacteroides sp.(4) Parabacteroides distasonis(3) clique97.80.77
3157Parvibaculum lavamentivorans(1) singleton
163Prochlorococcus marinus(2) clique97.510.86
1994Pseudomonas aeruginosa(1) singleton
973Rickettsia australis(2) Rickettsia akari(1) clique97.950.83
741Rickettsia canadensis(2) clique99.380.97
3642Roseiflexus castenholzii(1) singleton
470Serratia proteamaculans(2) clique98.350.89
4398Shewanella sediminis(1) singleton
827Ensifer medicae(6) clique99.450.85
1916Streptococcus gordonii(1) singleton
2659Sulfurovum sp.(1) singleton
3409Thermosipho melanesiensis(1) singleton
307Vibrio campbellii(3) Vibrio harveyi(2) clique group97.120.72
4727Xanthobacter autotrophicus(1) singleton
1943Beggiatoa sp.(1) singleton
1368Bacteroides capillosus(1) singleton
539Parabacteroides merdae(3) clique98.420.8
4163Eubacterium ventriosum(1) singleton
509Bacteroides caccae(2) clique99.410.73
3507Ruminococcus obeum(1) singleton
41unclassified(3) Ruminococcus torques(1) clique99.570.82
1890Limnobacter sp.(1) singleton
3052Marinobacter algicola(1) singleton
4624Roseobacter sp.(1) singleton
4609Plesiocystis pacifica(1) singleton
2236Planctomyces maris(1) singleton
4047Bacillus sp.(1) singleton
2288Erythrobacter sp.(1) singleton
3361Roseovarius sp.(1) singleton
1195Pedobacter sp.(1) singleton
4762Ulvibacter sp.(1) singleton
2562Vibrio shilonii(1) singleton
2732Caminibacter mediatlanticus(1) singleton
3786Lentisphaera araneosa(1) singleton
4669unclassified(1) singleton
2572Dorea longicatena(1) singleton
885Ruminococcus gnavus(1) unclassified(1) clique99.140.75
791Actinomyces odontolyticus(2) clique97.160.89
2777Acaryochloris marina(1) singleton
4538Alkaliphilus oremlandii(1) singleton
2268Azorhizobium caulinodans(1) singleton
777Bacillus weihenstephanensis(1) Bacillus cereus(19) Bacillus mycoides(1) clique97.630.81
2003Bartonella tribocorum(1) singleton
3594Bordetella petrii(1) singleton
535Burkholderia multivorans(7) clique98.110.83
2347Caldivirga maquilingensis(1) singleton
506Candidatus Sulcia muelleri(2) clique99.070.9
115Chloroflexus aurantiacus(1) Chloroflexus sp.(1) clique99.990.95
2084Clostridium phytofermentans(1) singleton
2524Deinococcus geothermalis(1) singleton
709Delftia acidovorans(1) Delftia sp.(1) clique97.930.82
1300Frankia sp.(1) singleton
754Gluconacetobacter diazotrophicus(2) clique99.20.85
773Lactobacillus helveticus(5) clique98.810.71
4141Methanococcus maripaludis(1) singleton
244Methylobacterium chloromethanicum(1) Methylobacterium extorquens(4) clique97.510.74
4864Nitrosopumilus maritimus(1) singleton
4391Petrotoga mobilis(1) singleton
3710Prochlorococcus marinus(1) singleton
1550Renibacterium salmoninarum(1) singleton
236Salinispora pacifica(2) Salinispora arenicola(41) clique98.780.86
4929Salmonella enterica(1) singleton
2205Shewanella pealeana(1) singleton
4647Sorangium cellulosum(1) singleton
3851Thermotoga lettingae(1) singleton
933Faecalibacterium prausnitzii(2) clique97.380.7
1973Parvimonas micra(1) singleton
3585Coprococcus eutactus(1) singleton
4014Oceanibulbus indolifex(1) singleton
788Clostridium bolteae(6) Clostridium clostridioforme(1) clique98.240.81
48Phaeobacter inhibens(1) Phaeobacter gallaeciensis(3) clique97.880.91
1654Kordia algicida(1) singleton
1516unclassified(1) singleton
1485Nisaea sp.(1) singleton
4849Eubacterium dolichum(1) singleton
614Bacteroides uniformis(3) Bacteroides sp.(2) clique98.130.78
4426Clostridium sp.(1) singleton
523Bacteroides sp.(2) Bacteroides ovatus(9) clique group96.780.72
1932Vibrio campbellii(1) singleton
2256Acholeplasma laidlawii(1) singleton
806Aeromonas salmonicida(4) clique98.440.81
1207Beijerinckia indica(1) singleton
4462Bordetella avium(1) singleton
2068Candidatus Desulforudis audaxviator(1) singleton
4239Candidatus Korarchaeum cryptofilum(1) singleton
2048Caulobacter sp.(1) singleton
3884Cenarchaeum symbiosum(1) singleton
453Clostridium botulinum(2) clique99.140.87
746Corynebacterium urealyticum(2) clique98.520.91
392Cyanothece sp.(2) clique1000.98
4739Exiguobacterium sibiricum(1) singleton
548Finegoldia magna(4) clique97.150.81
766Francisella philomiragia(6) clique98.210.9
2155Heliobacterium modesticaldum(1) singleton
823Lactobacillus fermentum(5) clique99.250.82
1077Leptothrix cholodnii(1) singleton
894Leuconostoc citreum(4) clique99.280.86
1594Lysinibacillus sphaericus(1) singleton
410Methylobacterium radiotolerans(1) Methylobacterium sp.(2) clique99.180.84
884Methylobacterium sp.(2) clique99.40.87
516Microcystis aeruginosa(13) Microcystis sp.(1) clique group96.740.72
623Mycobacterium abscessus(44) Mycobacterium massiliense(13) clique98.330.87
230Mycobacterium marinum(3) Mycobacterium ulcerans(1) clique98.850.76
3879Opitutus terrae(1) singleton
3220Pseudomonas putida(1) singleton
1236Pseudomonas putida(1) singleton
2590Shewanella halifaxensis(1) singleton
4193Shewanella woodyi(1) singleton
237Streptomyces sp.(1) Streptomyces griseus(1) clique99.350.89
814Synechococcus sp.(4) clique96.830.88
835Thermoanaerobacter brockii(1) Thermoanaerobacter pseudethanolicus(1) Thermoanaerobacter ethanolicus(1) Thermoanaerobacter sp.(3) clique98.680.85
2662Thermoproteus neutrophilus(1) singleton
1305Clostridium bartlettii(1) singleton
977Burkholderia oklahomensis(2) clique99.490.9
3905Burkholderia ubonensis(1) singleton
936Burkholderia thailandensis(3) clique99.60.84
146Dorea formicigenerans(2) Dorea sp.(1) clique97.670.67
52Bacillus sp.(2) Bacillus cereus(14) Bacillus thuringiensis(1) clique group98.320.85
851Clostridium butyricum(6) clique98.440.83
1183Clostridium botulinum(1) singleton
324Burkholderia sp.(1) Burkholderia graminis(1) clique98.370.87
68Haemophilus parasuis(3) Haemophilus sp.(1) clique98.310.85
460Escherichia albertii(3) clique98.740.81
1520Clostridium spiroforme(1) singleton
991Streptococcus infantarius(2) clique99.150.85
721Providencia stuartii(2) clique99.460.86
589Borrelia afzelii(4) clique99.580.76
3983Verrucomicrobium spinosum(1) singleton
4396Borrelia valaisiana(1) singleton
220Eubacterium siraeum(4) clique97.690.76
526Bifidobacterium dentium(4) clique99.320.89
1948Anaerofustis stercorihominis(1) singleton
900Bacteroides stercoris(2) clique98.690.77
108unclassified(1) Clostridium scindens(1) clique99.470.77
243Coprobacillus sp.(3) Clostridium ramosum(1) clique99.660.82
3984Alistipes putredinis(1) singleton
629Anaerostipes caccae(1) Anaerostipes sp.(1) clique98.390.76
852Bifidobacterium animalis(13) clique99.910.94
2577Fusobacterium nucleatum(1) singleton
895Listeria monocytogenes(5) clique group99.140.8
2894Gemmata obscuriglobus(1) singleton
830Anaerostipes hadrus(1) unclassified(2) Clostridium sp.(1) clique98.910.76
3953Thermotoga sp.(1) singleton
688Acidithiobacillus ferrooxidans(2) clique99.880.86
1533Akkermansia muciniphila(1) singleton
82Alteromonas macleodii(9) clique98.590.81
735Anaeromyxobacter sp.(1) Anaeromyxobacter dehalogenans(1) clique97.410.9
4298Borrelia hermsii(1) singleton
2512Borrelia turicatae(1) singleton
3866Burkholderia phymatum(1) singleton
2042Burkholderia phytofirmans(1) singleton
4242Candidatus Amoebophilus asiaticus(1) singleton
654Candidatus Cloacamonas acidaminovorans(1) unclassified(1) clique97.010.68
358Candidatus Kuenenia stuttgartiensis(2) clique99.320.69
1082Candidatus Phytoplasma australiense(1) singleton
3246Candidatus Phytoplasma mali(1) singleton
1544Cellvibrio japonicus(1) singleton
3102Chlorobaculum parvum(1) singleton
3936Chlorobium limicola(1) singleton
1156Chlorobium phaeobacteroides(1) singleton
2409Chloroherpeton thalassium(1) singleton
1852Clavibacter michiganensis(1) singleton
255Clostridium botulinum(3) clique98.60.83
4568Elusimicrobium minutum(1) singleton
2892Erwinia tasmaniensis(1) singleton
1703Geobacter bemidjiensis(1) singleton
3185Geobacter lovleyi(1) singleton
85Helicobacter sp.(2) Helicobacter pylori(41) clique group97.040.89
4447Hydrogenobaculum sp.(1) singleton
1894Kocuria rhizophila(1) singleton
665Leptospira biflexa(2) clique1000.98
2841Methylacidiphilum infernorum(1) singleton
4184Methylobacterium populi(1) singleton
2377Mycoplasma arthritidis(1) singleton
4675Natranaerobius thermophilus(1) singleton
4064Nostoc punctiforme(1) singleton
3525Orientia tsutsugamushi(1) singleton
1854Pelodictyon phaeoclathratiforme(1) singleton
2964Phenylobacterium zucineum(1) singleton
4103Prosthecochloris aestuarii(1) singleton
825Proteus mirabilis(7) clique99.290.88
782Ralstonia sp.(2) unclassified(1) Ralstonia pickettii(2) clique990.82
37Rhizobium phaseoli(1) Rhizobium etli(2) clique97.720.8
673Staphylococcus haemolyticus(2) clique99.270.83
985Stenotrophomonas maltophilia(3) clique98.30.87
447Stenotrophomonas maltophilia(2) clique98.330.83
568Streptococcus equi(5) clique97.260.83
3017Sulfurihydrogenibium sp.(1) singleton
412Aliivibrio fischeri(1) Vibrio fischeri(2) clique96.870.85
664Wolbachia unclassified(1) Wolbachia pipientis(1) Wolbachia endosymbiont(2) Wolbachia sp.(1) clique98.050.76
1266Candidatus Endomicrobium sp.(1) singleton
1666Ruminococcus lactaris(1) singleton
4186Borrelia spielmanii(1) singleton
3706Bacteroides coprocola(1) singleton
2506Clostridium sporogenes(1) singleton
3332Bacillus pumilus(1) singleton
4635Chthoniobacter flavus(1) singleton
4272Bacteroides intestinalis(1) singleton
4480Streptomyces sp.(1) singleton
44Borrelia garinii(5) clique98.240.82
4738unclassified(1) singleton
3433Capnocytophaga sputigena(1) singleton
4457Corynebacterium amycolatum(1) singleton
4690Bifidobacterium catenulatum(1) singleton
445Bifidobacterium pseudocatenulatum(2) clique97.880.87
3843Desulfovibrio piger(1) singleton
952Providencia alcalifaciens(2) clique98.930.85
4076Providencia rustigianii(1) singleton
1604Bacteroides finegoldii(1) singleton
1785Collinsella intestinalis(1) singleton
3451Collinsella stercoris(1) singleton
226Anaerococcus hydrogenalis(2) clique96.830.78
2583Bifidobacterium gallicum(1) singleton
60Pseudomonas syringae(10) clique99.160.85
919Helicobacter pylori(2) clique99.960.87
212Bacteroides eggerthii(2) clique98.780.75
1384Alicyclobacillus acidocaldarius(1) singleton
2796Bacteroides pectinophilus(1) singleton
1058Bacillus coahuilensis(1) singleton
2361Bacteroides plebeius(1) singleton
3233Burkholderia sp.(1) singleton
421Roseburia intestinalis(3) clique98.50.69
206Arthrospira maxima(1) unclassified(1) Arthrospira platensis(1) clique99.390.84
94Parabacteroides johnsonii(2) clique98.490.78
4570Clostridium hylemonae(1) singleton
1469Eubacterium biforme(1) singleton
4543Bifidobacterium angulatum(1) singleton
70Lactobacillus rhamnosus(11) Lactobacillus sp.(2) clique98.170.85
1397Mitsuokella multacida(1) singleton
3671Enterobacter cancerogenus(1) singleton
2785Clostridium nexile(1) singleton
350Bacteroides sp.(2) Bacteroides dorei(5) clique99.130.8
4221Clostridium hiranonis(1) singleton
451Rhizobium rhizogenes(1) Rhizobium sp.(1) Agrobacterium rhizogenes(1) clique98.450.84
1456Agrobacterium vitis(1) singleton
653Aliivibrio salmonicida(1) Aliivibrio logei(2) clique group98.040.64
2243Anoxybacillus flavithermus(1) singleton
3969Arthrobacter chlorophenolicus(1) singleton
880Bifidobacterium longum(2) clique1000.96
343Borrelia recurrentis(1) Borrelia duttonii(1) Borrelia crocidurae(1) clique98.410.77
1526Buchnera aphidicola(1) singleton
602Burkholderia cenocepacia(4) clique99.610.89
4546Candidatus Azobacteroides pseudotrichonymphae(1) singleton
1380Methanosphaerula palustris(1) singleton
3165Chloroflexus aggregans(1) singleton
1914Clostridium cellulolyticum(1) singleton
2787Coprothermobacter proteolyticus(1) singleton
3119Cyanothece sp.(1) singleton
1953Cyanothece sp.(1) singleton
963Cyanothece sp.(2) clique99.070.92
4049Desulfovibrio desulfuricans(1) singleton
1903Desulfovibrio vulgaris(1) singleton
294Desulfurococcus kamchatkensis(1) Desulfurococcus amylolyticus(1) Desulfurococcus fermentans(1) clique97.580.89
3973Dictyoglomus thermophilum(1) singleton
2111Dictyoglomus turgidum(1) singleton
3563Geobacter sp.(1) singleton
1871Halothermothrix orenii(1) singleton
3845Helicobacter pylori(1) singleton
4565Helicobacter pylori(1) singleton
282Klebsiella sp.(1) Klebsiella pneumoniae(1) Klebsiella variicola(1) clique99.120.88
2422Macrococcus caseolyticus(1) singleton
3547Methylobacterium nodulans(1) singleton
1622Methylocella silvestris(1) singleton
238Rhizobium leguminosarum(2) clique97.430.79
4598Rhodocista centenaria(1) singleton
3478Shewanella piezotolerans(1) singleton
1298Streptococcus uberis(1) singleton
4644Thermococcus onnurineus(1) singleton
194Thermodesulfovibrio yellowstonii(1) Thermodesulfovibrio islandicus(1) clique99.120.89
1302Thermomicrobium roseum(1) singleton
381Thermosipho africanus(2) clique98.760.81
1828Thermotoga neapolitana(1) singleton
4677Thioalkalivibrio sulfidophilus(1) singleton
529Ureaplasma urealyticum(14) clique99.370.87
1308Acidobacterium capsulatum(1) singleton
3533Caldicellulosiruptor bescii(1) singleton
836Azotobacter vinelandii(3) clique1000.98
3290Beutenbergia cavernae(1) singleton
544Brachyspira hyodysenteriae(2) clique99.10.93
433Brevibacillus brevis(2) clique970.86
81Burkholderia glumae(4) clique group99.510.62
4415Campylobacter lari(1) singleton
970Corynebacterium aurimucosum(2) clique1000.94
3753Corynebacterium kroppenstedtii(1) singleton
2754Deinococcus deserti(1) singleton
3797Desulfobacterium autotrophicum(1) singleton
726Escherichia fergusonii(3) clique98.80.89
4179Exiguobacterium sp.(1) singleton
1908Gemmatimonas aurantiaca(1) singleton
2840Halorubrum lacusprofundi(1) singleton
954Laribacter hongkongensis(2) clique99.10.89
2024Nautilia profundicola(1) singleton
1767Persephonella marina(1) singleton
4375Rhizobium sp.(1) singleton
6Rhodococcus erythropolis(3) clique98.680.83
4192Staphylococcus carnosus(1) singleton
505Sulfolobus islandicus(15) clique99.120.84
4386Sulfurihydrogenibium azorense(1) singleton
345Thauera aminoaromatica(2) clique99.060.82
1753Tolumonas auensis(1) singleton
1054Corynebacterium lipophiloflavum(1) singleton
683Clostridium cf. saccharolyticum(1) Clostridium sp.(1) clique98.220.61
2634Roseburia inulinivorans(1) singleton
4708unclassified(1) singleton
1089Campylobacter rectus(1) singleton
93Staphylococcus epidermidis(1) Staphylococcus capitis(2) Staphylococcus caprae(1) clique97.770.9
3300Wolbachia sp.(1) singleton
3714Actinomyces urogenitalis(1) singleton
1123Actinomyces coleocanis(1) singleton
2611Atopobium rimae(1) singleton
3684Streptococcus salivarius(1) singleton
2693Bacillus cereus(1) singleton
4162Bacillus cereus(1) singleton
367Bacillus cereus(2) clique96.80.78
487Staphylococcus epidermidis(1) Staphylococcus hominis(3) clique98.670.89
522Bifidobacterium bifidum(7) clique99.290.87
2138Providencia rettgeri(1) singleton
396Lactobacillus hilgardii(1) Lactobacillus buchneri(1) Lactobacillus brevis(1) clique98.280.78
465Lactobacillus ruminis(4) clique98.440.83
2074Lactobacillus ultunensis(1) singleton
3324Lactobacillus vaginalis(1) singleton
4408Pectobacterium carotovorum(1) singleton
2143Anaerococcus tetradius(1) singleton
221Acidaminococcus sp.(2) Acidaminococcus intestini(2) clique99.830.88
2668Corynebacterium striatum(1) singleton
408Corynebacterium accolens(2) clique96.980.91
744Atopobium vaginae(2) clique99.990.95
165Lactobacillus gasseri(2) clique98.620.83
133Pseudogulbenkiania sp.(1) Pseudogulbenkiania ferrooxidans(1) clique97.540.86
1459Shuttleworthia satelles(1) singleton
2584Veillonella dispar(1) singleton
4215Citrobacter youngae(1) singleton
1653unclassified(1) singleton
2961Chryseobacterium gleum(1) singleton
1034Corynebacterium pseudogenitalium(1) singleton
4616Glaciecola sp.(1) singleton
768Bifidobacterium breve(7) clique98.770.83
4488Holdemania filiformis(1) singleton
2681Oribacterium sinus(1) singleton
3785Marvinbryantia formatexigens(1) singleton
290Mobiluncus mulieris(4) clique99.10.87
2146Catenibacterium mitsuokai(1) singleton
948Bacteroides sp.(1) Bacteroides cellulosilyticus(2) clique97.860.73
2678Clostridium asparagiforme(1) singleton
4529Capnocytophaga gingivalis(1) singleton
1144Listeria grayi(1) singleton
2968unclassified(1) singleton
846Enterococcus faecium(12) clique98.530.85
83Bacillus subtilis(29) clique98.780.89
1225Sphingobacterium spiritivorum(1) singleton
685Corynebacterium glucuronolyticum(2) clique98.870.9
583Helicobacter cinaedi(3) clique99.560.88
3912Porphyromonas uenonis(1) singleton
1945Subdoligranulum variabile(1) singleton
3672Anaerococcus lactolyticus(1) singleton
121Blautia hansenii(1) unclassified(1) clique98.610.75
582Propionibacterium acidifaciens(1) Porphyromonas endodontalis(1) clique1000.98
2298Neisseria cinerea(1) singleton
3986Pectobacterium carotovorum(1) singleton
770Bacillus cereus(16) Bacillus thuringiensis(1) clique99.050.87
305Bacillus pseudomycoides(1) Bacillus sp.(2) Bacillus cereus(3) Bacillus mycoides(2) clique97.840.82
2Bacillus cereus(6) clique98.550.82
4530Bacillus cereus(1) singleton
2052Abiotrophia defectiva(1) singleton
1677Dethiobacter alkaliphilus(1) singleton
1106Catonella morbi(1) singleton
2827Neisseria subflava(1) singleton
2622Desulfonatronospira thiodismutans(1) singleton
4328Bacteroides coprophilus(1) singleton
2168Neisseria flavescens(1) singleton
1835Blautia hydrogenotrophica(1) singleton
2633Prevotella copri(1) singleton
4740Rhodococcus erythropolis(1) singleton
1510Eubacterium hallii(1) singleton
3143Clostridium methylpentosum(1) singleton
224Corynebacterium matruchotii(2) clique97.660.88
742Lactobacillus crispatus(10) clique98.670.8
407Helicobacter canadensis(2) clique1000.96
292Acinetobacter sp.(1) Acinetobacter haemolyticus(7) clique98.170.84
964Lactobacillus jensenii(3) clique99.630.9
1600Helicobacter pullorum(1) singleton
758Acetobacter pasteurianus(12) clique98.980.87
2500Acidimicrobium ferrooxidans(1) singleton
4730Actinosynnema mirum(1) singleton
879Aggregatibacter aphrophilus(3) clique97.730.91
4495Alicyclobacillus acidocaldarius(1) singleton
3790Anaerococcus prevotii(1) singleton
4065Atopobium parvulum(1) singleton
362Bartonella grahamii(2) clique99.540.86
3763Brachybacterium faecium(1) singleton
4453Candidatus Accumulibacter phosphatis(1) singleton
387Candidatus Hamiltonella defensa(2) clique96.940.68
138Candidatus Liberibacter asiaticus(2) clique99.930.93
1046Candidatus Sulcia muelleri(1) singleton
298Capnocytophaga ochracea(3) Capnocytophaga sp.(5) clique96.920.84
1634Catenulispora acidiphila(1) singleton
2245Chitinophaga pinensis(1) singleton
341Corynebacterium efficiens(2) clique1000.91
1609Cryptobacterium curtum(1) singleton
178Cupriavidus taiwanensis(2) clique99.030.91
3217Desulfohalobium retbaense(1) singleton
3862Desulfomicrobium baculatum(1) singleton
1631Desulfotomaculum acetoxidans(1) singleton
4857Desulfovibrio magneticus(1) singleton
2191Desulfovibrio salexigens(1) singleton
4913Dickeya dadantii(1) singleton
902Dickeya sp.(1) Dickeya zeae(1) clique98.060.86
1049Dyadobacter fermentans(1) singleton
186Edwardsiella ictaluri(2) clique99.980.93
137Eggerthella lenta(1) Eggerthella sp.(2) clique98.560.83
3323Eubacterium eligens(1) singleton
587Eubacterium rectale(3) clique98.190.69
3624unclassified(1) singleton
1576Flavobacterium johnsoniae(1) singleton
4354Geobacillus sp.(1) singleton
2819Geobacter sp.(1) singleton
946Halomicrobium mukohataei(1) Halomicrobium katesii(1) clique97.440.81
1405Halorhabdus utahensis(1) singleton
2984Helicobacter pylori(1) singleton
1987Hirschia baltica(1) singleton
4379Jonesia denitrificans(1) singleton
3541Kangiella koreensis(1) singleton
2965Kosmotoga olearia(1) singleton
4477Kytococcus sedentarius(1) singleton
3653Leptotrichia buccalis(1) singleton
1937Methanocaldococcus fervens(1) singleton
3789Methylotenera mobilis(1) singleton
978Methylovorus glucosetrophus(1) Methylovorus sp.(1) clique96.930.85
686Micrococcus luteus(4) clique97.770.8
4569Mycoplasma conjunctivae(1) singleton
1108Nakamurella multipartita(1) singleton
1525Neorickettsia risticii(1) singleton
3484Paenibacillus sp.(1) singleton
4040Pectobacterium carotovorum(1) singleton
34Pedobacter heparinus(2) clique1000.99
4355Photorhabdus asymbiotica(1) singleton
2230Ralstonia pickettii(1) singleton
423Rhizobium leguminosarum(2) clique98.610.91
1070Saccharomonospora viridis(1) singleton
4100Slackia heliotrinireducens(1) singleton
597Streptococcus dysgalactiae(6) clique98.980.82
235Teredinibacter turnerae(4) clique98.380.9
1025Thermococcus gammatolerans(1) singleton
3256Thermococcus sibiricus(1) singleton
322Variovorax paradoxus(2) clique98.420.86
3075Eubacterium saphenum(1) singleton
4444Sulfurihydrogenibium yellowstonense(1) singleton
3775Corynebacterium tuberculostearicum(1) singleton
1513Campylobacter showae(1) singleton
689Acidithiobacillus caldus(2) clique99.180.74
2282Streptomyces griseoflavus(1) singleton
986Clostridium carboxidivorans(2) clique99.990.74
3231Selenomonas flueggei(1) singleton
524Mycobacterium indicus(1) Mycobacterium sp.(3) Mycobacterium intracellulare(5) clique98.60.89
528Acinetobacter radioresistens(8) clique98.80.87
908Anaerococcus vaginalis(1) Anaerococcus sp.(1) clique96.850.8
3927Clostridium papyrosolvens(1) singleton
208Ochrobactrum intermedium(2) clique99.650.82
2317Actinobacillus minor(1) singleton
3392Neisseria flavescens(1) singleton
2547Acidovorax delafieldii(1) singleton
943Bacteroides fragilis(3) clique97.910.8
1564Yersinia rohdei(1) singleton
1595Yersinia kristensenii(1) singleton
3837Yersinia ruckeri(1) singleton
1184Yersinia aldovae(1) singleton
3443Weissella paramesenteroides(1) singleton
3436Legionella drancourtii(1) singleton
3609Rothia mucilaginosa(1) singleton
576Alteromonas macleodii(4) clique97.940.85
2813Sphingobacterium spiritivorum(1) singleton
149Clostridium botulinum(2) clique99.230.6
875Streptomyces sp.(1) Streptomyces roseosporus(2) clique97.820.79
633Streptomyces sp.(3) Streptomyces albus(2) clique99.10.86
162Streptomyces viridosporus(1) Streptomyces ghanaensis(1) clique99.480.86
4584Staphylococcus warneri(1) singleton
293Fusobacterium nucleatum(3) Fusobacterium sp.(6) clique97.930.79
3358Gemella haemolysans(1) singleton
4550Mycobacterium kansasii(1) singleton
1584Staphylococcus epidermidis(1) singleton
4575Streptomyces sp.(1) singleton
3013Streptomyces viridochromogenes(1) singleton
3559Streptomyces hygroscopicus(1) singleton
4672Pedosphaera parvula(1) singleton
369Comamonas testosteroni(2) clique99.370.85
1362Thermus aquaticus(1) singleton
2727Streptomyces sp.(1) singleton
378Selenomonas sputigena(2) clique1000.95
313Fusobacterium gonidiaformans(1) Fusobacterium sp.(1) clique98.610.81
704Prevotella oris(3) clique97.40.78
713Selenomonas noxia(2) clique98.290.89
1467Enhydrobacter aerosaccus(1) singleton
2740Bacteroides sp.(1) singleton
4912Granulicatella adiacens(1) singleton
4468Cardiobacterium hominis(1) singleton
2435Actinomyces sp.(1) singleton
1063Prevotella bergensis(1) singleton
2870Ruminococcus flavefaciens(1) singleton
1963Faecalibacterium prausnitzii(1) singleton
559Lactobacillus sp.(1) Lactobacillus iners(14) clique98.860.87
2491Dialister invisus(1) singleton
4784Butyrivibrio crossotus(1) singleton
3395Clostridium hathewayi(1) singleton
638Prevotella veroralis(2) clique97.150.78
225Slackia exigua(1) Slackia sp.(1) clique98.450.88
1787Lactobacillus antri(1) singleton
2523Prevotella tannerae(1) singleton
687Vibrio alginolyticus(3) Vibrio mimicus(3) clique97.610.86
4817Fusobacterium periodonticum(1) singleton
372Streptomyces sp.(4) clique98.810.78
993Fusobacterium necrophorum(2) Fusobacterium sp.(1) clique98.930.83
399Erysipelothrix rhusiopathiae(2) clique99.110.93
103Jonquetella anthropi(2) clique99.620.89
354Arthrospira platensis(2) clique99.570.69
600Fusobacterium sp.(1) Fusobacterium ulcerans(1) clique98.680.79
508Leptotrichia hofstadii(2) clique96.780.77
295Treponema vincentii(2) clique98.060.83
1172Oxalobacter formigenes(1) singleton
2325Fusobacterium mortiferum(1) singleton
2012Helicobacter winghamensis(1) singleton
724Citrobacter sp.(1) Citrobacter freundii(1) clique97.60.85
2672Helicobacter bilis(1) singleton
2692Clostridium sp.(1) singleton
4421Escherichia sp.(1) singleton
147Fusobacterium periodonticum(1) Fusobacterium sp.(1) clique98.150.8
59Bacteroides sp.(4) Bacteroides xylanisolvens(14) Bacteroides ovatus(1) clique group97.220.75
3333Oxalobacter formigenes(1) singleton
543Acinetobacter baumannii(1) Acinetobacter calcoaceticus(5) clique97.640.91
1553Acinetobacter johnsonii(1) singleton
789Acinetobacter junii(6) clique97.940.81
519Acinetobacter lwoffii(4) clique group96.630.82
4482Fusobacterium varium(1) singleton
3335Lactobacillus coleohominis(1) singleton
1008Lactobacillus jensenii(3) clique99.850.93
129Blautia wexlerae(2) Ruminococcus sp.(1) clique group97.380.63
3799Acidaminococcus fermentans(1) singleton
994Ammonifex degensii(1) Ammonifex degensii (1) clique99.990.94
4928Anaplasma centrale(1) singleton
1545unclassified(1) singleton
3768Bacillus pseudofirmus(1) singleton
850Blattabacterium sp.(2) clique97.420.97
3976Citrobacter rodentium(1) singleton
1203Conexibacter woesei(1) singleton
655Cronobacter turicensis(2) clique97.540.72
572Dehalococcoides mccartyi(2) clique97.810.85
3938Dickeya dadantii(1) singleton
406Edwardsiella tarda(3) clique99.620.91
428Fibrobacter succinogenes(2) clique99.990.91
564Gardnerella vaginalis(2) clique98.380.86
187Paenibacillus lautus(1) Paenibacillus sp.(1) clique97.230.87
4460Geodermatophilus obscurus(1) singleton
3285Gordonia bronchialis(1) singleton
4275Haliangium ochraceum(1) singleton
2100Haloterrigena turkmenica(1) singleton
3839Halothiobacillus neapolitanus(1) singleton
705Hydrogenobacter thermophilus(2) clique1000.98
2118Kribbella flavida(1) singleton
3906Methanobrevibacter ruminantium(1) singleton
1197Methanocaldococcus vulcanius(1) singleton
515Mycoplasma hominis(2) clique98.130.87
370Pectobacterium wasabiae(1) Pectobacterium sp.(1) clique98.980.91
4253Pirellula staleyi(1) singleton
1714Rhodothermus marinus(1) singleton
2735Robiginitalea biformata(1) singleton
1615Rothia mucilaginosa(1) singleton
2384Sebaldella termitidis(1) singleton
1927Sphaerobacter thermophilus(1) singleton
3767Spirosoma linguale(1) singleton
3243Streptobacillus moniliformis(1) singleton
1005Streptococcus gallolyticus(3) Streptococcus pasteurianus(1) Streptococcus bovis(1) Streptococcus gallolyticus=(1) clique97.930.78
4916Streptosporangium roseum(1) singleton
3434Sulfurospirillum deleyianum(1) singleton
4340Thermanaerovibrio acidaminovorans(1) singleton
3683Thermobaculum terrenum(1) singleton
4031Thermomonospora curvata(1) singleton
3253Veillonella parvula(1) singleton
316Vibrio alginolyticus(1) Vibrio sp.(2) clique98.520.89
3916Xanthomonas albilineans(1) singleton
1019Xylanimonas cellulosilytica(1) singleton
3552Cyanobacterium sp.(1) singleton
4653Aciduliprofundum boonei(1) singleton
2400Allochromatium vinosum(1) singleton
4095Aminobacterium colombiense(1) singleton
1870Anabaena variabilis(1) singleton
3824Arcanobacterium haemolyticum(1) singleton
1264Arcobacter nitrofigilis(1) singleton
386Bacillus sp.(1) Bacillus megaterium(3) Bacillus flexus(1) clique97.430.86
2714Bacillus selenitireducens(1) singleton
2834Kyrpidia tusciae(1) singleton
3501Brachyspira murdochii(1) singleton
31Burkholderia sp.(2) clique98.040.8
3240Candidatus Puniceispirillum marinum(1) singleton
893Arsenophonus pediculi(1) Candidatus Riesia pediculicola(1) clique1000.94
1189Caulobacter segnis(1) singleton
3083Cellulomonas flavigena(1) singleton
1921unclassified(1) singleton
769Comamonas testosteroni(2) clique97.690.84
4522Coraliomargarita akajimensis(1) singleton
1268Deferribacter desulfuricans(1) singleton
2919Denitrovibrio acetiphilus(1) singleton
1982Desulfurivibrio alkaliphilus(1) singleton
573Enterobacter cloacae(2) clique98.740.71
1003Erwinia amylovora(3) clique99.990.95
620Erwinia pyrifoliae(2) Erwinia sp.(1) clique98.90.9
2060Ferroglobus placidus(1) singleton
87Haloferax sp.(4) Haloferax alexandrinus(1) Haloferax lucentense(1) Haloferax volcanii(2) clique98.060.86
1132Helicobacter mustelae(1) singleton
976Leuconostoc kimchii(2) clique99.520.83
682Listeria seeligeri(3) clique98.360.78
39Meiothermus ruber(3) clique99.430.95
4417Meiothermus silvanus(1) singleton
3291Methanocaldococcus infernus(1) singleton
1521Methanocaldococcus sp.(1) singleton
1148Methanococcus voltae(1) singleton
1616Methanohalophilus mahii(1) singleton
2535Methylotenera versatilis(1) singleton
1004Moraxella catarrhalis(12) clique99.340.9
736Mycoplasma agalactiae(2) clique1000.98
4731Mycoplasma crocodyli(1) singleton
801Natrialba magadii(2) clique99.990.95
4582Nitrosococcus halophilus(1) singleton
699Nocardiopsis sp.(1) Nocardiopsis dassonvillei(1) clique98.40.86
272Pantoea ananatis(4) Pantoea sp.(1) clique99.170.86
4159Planctomyces limnophilus(1) singleton
3188Prevotella ruminicola(1) singleton
2337Rhodobacter capsulatus(1) singleton
4332Rhodococcus opacus(1) singleton
3050Sanguibacter keddieii(1) singleton
1799Segniliparus rotundus(1) singleton
1471Shewanella violacea(1) singleton
4113Sideroxydans lithotrophicus(1) singleton
287Sphingobium japonicum(1) Sphingobium indicum(1) unclassified(1) clique98.030.66
3452Stackebrandtia nassauensis(1) singleton
327Staphylococcus epidermidis(1) Staphylococcus lugdunensis(4) clique99.650.93
2526Staphylothermus hellenicus(1) singleton
4694Streptococcus mitis(1) singleton
3454Streptomyces scabiei(1) singleton
4234Syntrophothermus lipocalidus(1) singleton
2771Thermincola potens(1) singleton
525Thermoanaerobacter mathranii(1) Thermoanaerobacter italicus(1) Thermoanaerobacter thermocopriae(1) clique98.480.82
3355Thermobispora bispora(1) singleton
1837Thermocrinis albus(1) singleton
3045Thermosphaera aggregans(1) singleton
934Thioalkalivibrio sp.(2) clique97.130.86
96Thiomonas arsenitoxydans(1) Thiomonas intermedia(1) clique97.150.77
3771Truepera radiovictrix(1) singleton
1250Tsukamurella paurometabola(1) singleton
3247Waddlia chondrophila(1) singleton
2640Xenorhabdus bovienii(1) singleton
4748Zunongwangia profunda(1) singleton
364Mycoplasma mycoides(4) clique97.650.86
3136Streptomyces bingchenggensis(1) singleton
2551Achromobacter piechaudii(1) singleton
1079Aerococcus viridans(1) singleton
753Aggregatibacter actinomycetemcomitans(17) clique98.670.83
2374Anaerobaculum sp.(1) singleton
622Bacillus subtilis(3) clique97.910.92
2726Brevibacterium mcbrellneri(1) singleton
3620Bulleidia extructa(1) singleton
1679Campylobacter jejuni(1) singleton
3852Citromicrobium bathyomarinum(1) singleton
2082Corynebacterium ammoniagenes(1) singleton
4788Cylindrospermopsis raciborskii(1) singleton
3971Desulfovibrio sp.(1) singleton
333Edwardsiella tarda(3) clique98.630.85
755Gardnerella vaginalis(2) clique98.760.88
3921Gluconacetobacter hansenii(1) singleton
3838Grimontia hollisae(1) singleton
3573Lactobacillus amylolyticus(1) singleton
599Legionella longbeachae(2) clique99.860.92
148Leptotrichia goodfellowii(2) clique97.390.88
608Mannheimia haemolytica(10) Mannheimia sp.(1) clique99.430.88
556unclassified(2) clique99.240.87
2352Mycobacterium parascrofulaceum(1) singleton
1750Mycoplasma alligatoris(1) singleton
1356Oribacterium sp.(1) singleton
752Parachlamydia acanthamoebae(2) clique99.690.91
1773Pasteurella dagmatis(1) singleton
4Peptoniphilus lacrimalis(2) Peptoniphilus sp.(1) clique97.950.78
437Peptostreptococcus anaerobius(3) clique99.320.86
841Photobacterium damselae(2) clique97.110.66
796Prevotella bivia(2) clique1000.94
2591Prevotella buccalis(1) singleton
136Prevotella loescheii(1) Prevotella sp.(1) clique97.170.87
1075Prevotella timonensis(1) singleton
2418Pyramidobacter piscolens(1) singleton
3625Raphidiopsis brookii(1) singleton
2715Rhodobacter sp.(1) singleton
957Rhodococcus equi(2) clique99.130.9
3081Ruminococcus albus(1) singleton
302Serratia odorifera(2) Serratia plymuthica(6) clique97.940.89
3085Serratia odorifera(1) singleton
125Streptococcus oralis(2) clique99.980.92
634Turicibacter sanguinis(1) Turicibacter sp.(1) clique99.630.92
168Veillonella sp.(2) Veillonella parvula(1) clique96.640.85
379Vibrio coralliilyticus(2) clique96.780.87
389Vibrio furnissii(2) clique98.240.9
253Vibrio harveyi(1) Vibrio cholerae(1) clique96.590.88
1962Vibrio metschnikovii(1) singleton
143Vibrio orientalis(2) clique1000.97
4832Vibrio sp.(1) singleton
2299Vibrio sp.(1) singleton
475Xanthomonas oryzae(1) Xanthomonas vasicola(4) Xanthomonas campestris(8) clique99.460.87
532Acinetobacter baumannii(2) Acinetobacter sp.(2) Acinetobacter calcoaceticus(1) Acinetobacter nosocomialis(4) clique97.880.85
759Acinetobacter baumannii(2) Acinetobacter pittii(4) Acinetobacter sp.(5) Acinetobacter calcoaceticus(2) clique group97.090.85
4118Alcanivorax sp.(1) singleton
4922Brevundimonas sp.(1) singleton
156unclassified(1) Sulfurimonas sp.(1) clique1000.95
1260Caldanaerobacter subterraneus(1) singleton
2058Citreicella sp.(1) singleton
2425Cyanobium sp.(1) singleton
1009Enterococcus casseliflavus(5) Enterococcus sp.(1) clique98.660.84
981Enterococcus gallinarum(1) Enterococcus saccharolyticus(1) clique99.780.92
853unclassified(1) Eubacterium sp.(1) clique98.140.83
2673Fusobacterium sp.(1) singleton
3346Granulicatella elegans(1) singleton
4251Methylophaga thiooxydans(1) singleton
2469Microcoleus chthonoplastes(1) singleton
3808Micromonospora carbonacea(1) singleton
131Octadecabacter arcticus(2) clique99.990.85
3705Paenibacillus sp.(1) singleton
427Parascardovia denticolens(3) clique99.220.88
845Pediococcus acidilactici(4) Pediococcus lolii(1) clique98.060.83
786Prevotella buccae(2) Prevotella sp.(1) clique98.720.84
4397Prevotella melaninogenica(1) singleton
2356Prevotella sp.(1) singleton
4148Prevotella sp.(1) singleton
3835Pseudovibrio sp.(1) singleton
3004Ruegeria sp.(1) singleton
1806unclassified(1) singleton
897unclassified(1) Phaeobacter daeponensis(1) clique98.60.84
4680Rickettsia unclassified(1) singleton
4101Sulfitobacter sp.(1) singleton
2942Nautella italica(1) singleton
3571Scardovia inopinata(1) singleton
2392Ruegeria lacuscaerulensis(1) singleton
72Ruegeria mobilis(2) Ruegeria sp.(1) clique96.890.77
3349Simonsiella muelleri(1) singleton
2365Stenotrophomonas sp.(1) singleton
1882Streptococcus sp.(1) singleton
2020Streptococcus sp.(1) singleton
941Streptomyces clavuligerus(3) clique99.970.88
3638Streptomyces sp.(1) singleton
2929Streptomyces sp.(1) singleton
3088Synechococcus sp.(1) singleton
4802Thalassobium sp.(1) singleton
2955unclassified(1) singleton
3439Vibrio parahaemolyticus(1) singleton
1642unclassified(1) singleton
4318unclassified(1) singleton
3305unclassified(1) singleton
1343unclassified(1) singleton
4771Nostoc azollae(1) singleton
3558Acetohalobium arabaticum(1) singleton
4217Acidilobus saccharovorans(1) singleton
2110Acinetobacter sp.(1) singleton
30Amycolatopsis mediterranei(4) clique1000.99
42Brachyspira pilosicoli(4) clique98.410.81
1129Brevundimonas subvibrioides(1) singleton
3236Burkholderia sp.(1) singleton
1419Butyrivibrio proteoclasticum(1) singleton
3770Caldicellulosiruptor obsidiansis(1) singleton
3819Candidatus Sulcia muelleri(1) singleton
2164Candidatus Zinderia insecticola(1) singleton
435Clostridium cellulovorans(2) clique1000.93
871Clostridium autoethanogenum(2) Clostridium ljungdahlii(1) clique99.510.89
2136Clostridium saccharolyticum(1) singleton
468Corynebacterium pseudotuberculosis(15) clique99.350.94
4775Croceibacter atlanticus(1) singleton
2412Cyanothece sp.(1) singleton
4197Dehalogenimonas lykanthroporepellens(1) singleton
2122Desulfarculus baarsii(1) singleton
3899Dickeya dadantii(1) singleton
3422Ferrimonas balearica(1) singleton
1244Maribacter sp.(1) singleton
2552Gallionella capsiferriformans(1) singleton
839Halalkalicoccus jeotgali(3) clique1000.95
2315Halomonas elongata(1) singleton
1682Helicobacter pylori(1) singleton
2945Helicobacter pylori(1) singleton
4084Herbaspirillum seropedicae(1) singleton
3509Hyphomicrobium denitrificans(1) singleton
4299Ignisphaera aggregans(1) singleton
4599Methanohalobium evestigatum(1) singleton
2383Methanoplanus petrolearius(1) singleton
4754Methanothermobacter marburgensis(1) singleton
400Micromonospora aurantiaca(1) unclassified(2) clique99.310.9
641Mobiluncus curtisii(4) clique group97.370.91
328Mycoplasma fermentans(3) clique99.670.84
63Mycoplasma hyorhinis(6) clique99.670.89
4869Nitrosococcus watsoni(1) singleton
2842Olsenella uli(1) singleton
4339Paenibacillus polymyxa(1) singleton
2180Pantoea vagans(1) singleton
1322Parvularcula bermudensis(1) singleton
3010Prevotella melaninogenica(1) singleton
1897Spirochaeta smaragdinae(1) singleton
3553Spirochaeta thermophila(1) singleton
2432Starkeya novella(1) singleton
2753Sulfurimonas autotrophica(1) singleton
493Thermoanaerobacterium thermosaccharolyticum(2) clique96.740.78
3560Thermosediminibacter oceani(1) singleton
359Vulcanisaeta distributa(1) Stygiolobus azoricus(1) clique1000.99
2033Afipia sp.(1) singleton
4789Ahrensia sp.(1) singleton
1208Atopobium vaginae(1) singleton
4372Corynebacterium genitalium(1) singleton
2173Desulfovibrio fructosovorans(1) singleton
113Eubacterium yurii(1) Eubacterium sp.(1) clique97.150.87
1312Finegoldia magna(1) singleton
503Gardnerella vaginalis(14) clique group97.040.85
1066Ktedonobacter racemifer(1) singleton
479Lysinibacillus fusiformis(2) clique99.70.94
3042Maritimibacter alkaliphilus(1) singleton
3580Methylobacter tundripaludum(1) singleton
444Oscillatoria sp.(1) Oscillatoria formosa(1) clique99.990.93
4734Paenibacillus curdlanolyticus(1) singleton
495Pantoea agglomerans(1) Pantoea sp.(1) clique99.190.86
4297Pelagibaca bermudensis(1) singleton
1568Peptoniphilus duerdenii(1) singleton
2993Peptostreptococcus stomatis(1) singleton
368Prevotella amnii(2) clique98.50.84
490Prevotella bryantii(2) clique99.140.81
2917Prevotella disiens(1) singleton
2159Prevotella marshii(1) singleton
184Pseudomonas syringae(2) clique98.360.84
2258unclassified(1) singleton
3104Selenomonas sp.(1) singleton
4842Streptococcus mitis(1) singleton
2655Streptococcus mitis(1) singleton
3294Streptococcus mitis(1) singleton
1122Streptococcus mitis(1) singleton
3730Streptococcus mitis(1) singleton
2823Streptococcus sp.(1) singleton
4226Streptomyces violaceusniger(1) singleton
826Veillonella sp.(2) Veillonella atypica(3) clique group96.610.86
4268unclassified(1) singleton
2124Bacteroides sp.(1) singleton
513Parasutterella excrementihominis(1) unclassified(1) clique98.310.79
383Candidatus Regiella insecticola(2) clique96.670.61
987Desulfovibrio sp.(2) clique99.380.81
1686Neisseria sp.(1) singleton
3850Peptoniphilus sp.(1) singleton
2573Roseibium sp.(1) singleton
1010Rothia dentocariosa(2) clique96.810.88
2049Streptomyces pristinaespiralis(1) singleton
4142Streptomyces sviceus(1) singleton
3192Achromobacter xylosoxidans(1) singleton
1026Granulicella tundricola(1) singleton
679Alicycliphilus denitrificans(2) clique98.970.82
4425Anaerolinea thermophila(1) singleton
3604Arthrobacter arilaitensis(1) singleton
4009Asticcacaulis excentricus(1) singleton
51Bacillus amyloliquefaciens(4) clique99.650.93
795Bacillus atrophaeus(15) clique99.820.97
1238Bacillus cellulosilyticus(1) singleton
4406Bacteroides helcogenes(1) singleton
2184Bacteroides salanitronis(1) singleton
697Bartonella clarridgeiae(2) clique99.990.95
13Burkholderia sp.(2) Burkholderia phenoliruptrix(2) clique98.770.8
1500Caldicellulosiruptor hydrothermalis(1) singleton
757Caldicellulosiruptor kristjanssonii(3) Caldicellulosiruptor lactoaceticus(1) Caldicellulosiruptor acetigenus(1) clique98.710.82
1127Caldicellulosiruptor kronotskyensis(1) singleton
4884Caldicellulosiruptor owensensis(1) singleton
3318Calditerrivibrio nitroreducens(1) singleton
2157Candidatus Blochmannia vafer(1) singleton
2220Candidatus Liberibacter solanacearum(1) singleton
3496Candidatus Nitrospira defluvii(1) singleton
4127Cellulophaga algicola(1) singleton
3788Cellulophaga lytica(1) singleton
4630Clostridium sticklandii(1) singleton
2407Deinococcus maricopensis(1) singleton
3483Deinococcus proteolyticus(1) singleton
1253Desulfobulbus propionicus(1) singleton
2156Desulfovibrio aespoeensis(1) singleton
1880Desulfurispirillum indicum(1) singleton
2367Desulfurobacterium thermolithotrophum(1) singleton
750Desulfurococcus mucosus(1) Desulfurococcus mobilis(1) clique99.880.86
1502Enterobacter cloacae(1) singleton
3326Erwinia billingiae(1) singleton
2091Ethanoligenens harbinense(1) singleton
4124Eubacterium limosum(1) singleton
3153Frankia sp.(1) singleton
439Geobacillus Geobacillus(1) Geobacillus thermoglucosidasius(2) Geobacillus sp.(1) clique99.360.84
3811Geobacter sp.(1) singleton
4517Halanaerobium hydrogenoformans(1) singleton
176Halogeometricum borinquense(2) clique1000.97
4921Helicobacter felis(1) singleton
3277Ilyobacter polytropus(1) singleton
2025Intrasporangium calvum(1) singleton
681Ketogulonicigenium vulgare(2) clique99.970.91
3204Leadbetterella byssophila(1) singleton
703Leuconostoc gasicomitatum(1) Leuconostoc inhae(1) clique99.440.68
3618Marivirga tractuosa(1) singleton
740Mesorhizobium loti(1) Mesorhizobium ciceri(2) clique98.490.87
2046Methanothermus fervidus(1) singleton
500Mycoplasma bovis(3) clique98.590.86
153Mycoplasma leachii(2) clique99.630.94
167Neisseria lactamica(2) clique97.440.82
1551Nitratifractor salsuginis(1) singleton
4378Oceanithermus profundus(1) singleton
2232Odoribacter splanchnicus(1) singleton
925Paenibacillus polymyxa(2) clique99.860.89
3716Paludibacter propionicigenes(1) singleton
4385Pantoea sp.(1) singleton
2225Pedobacter saltans(1) singleton
4845Planctomyces brasiliensis(1) singleton
2646Propionibacterium freudenreichii(1) singleton
283Pseudoalteromonas sp.(3) clique98.370.89
1900Pseudomonas fluorescens(1) singleton
3199Pseudoxanthomonas suwonensis(1) singleton
120Rahnella sp.(1) Rahnella aquatilis(1) clique99.670.91
4392Rhodomicrobium vannielii(1) singleton
3260Rhodopseudomonas palustris(1) singleton
126Riemerella anatipestifer(6) clique99.610.95
1369Ruminococcus albus(1) singleton
464Staphylococcus pseudintermedius(2) clique99.360.9
4900Sulfuricurvum kujiense(1) singleton
2702Syntrophobotulus glycolicus(1) singleton
291Taylorella equigenitalis(3) clique99.650.93
1983Terriglobus saanensis(1) singleton
3632Thermaerobacter marianensis(1) singleton
2818Thermovibrio ammonificans(1) singleton
4515Thermus scotoductus(1) singleton
2290Variovorax paradoxus(1) singleton
2017Xenorhabdus nematophila(1) singleton
4897Actinobacillus ureae(1) singleton
473Actinomyces naeslundii(1) Actinomyces oris(1) clique98.030.78
2966Actinomyces sp.(1) singleton
457Actinomyces sp.(2) clique98.370.84
1567Actinomyces sp.(1) singleton
340Actinomyces sp.(1) Actinomyces viscosus(1) clique96.870.83
4092Aggregatibacter segnis(1) singleton
886Bacillus sp.(1) Bacillus oceanisediminis(1) clique98.930.84
4216Bacillus sp.(1) singleton
181Bilophila sp.(1) Bilophila wadsworthia(1) clique97.790.79
847Clostridium innocuum(1) unclassified(3) Clostridium sp.(2) clique98.370.8
938Clostridium symbiosum(2) Clostridium sp.(1) clique99.020.78
1011Coprobacillus sp.(2) clique1000.96
2566Dermacoccus sp.(1) singleton
906Dialister microaerophilus(2) clique98.280.81
1023Dietzia cinnamea(1) singleton
4911unclassified(1) singleton
3565Enterococcus italicus(1) singleton
911Eremococcus coleocola(2) clique99.30.85
2956unclassified(1) singleton
937Eubacterium saburreum(2) clique97.830.81
1585Faecalibacterium prausnitzii(1) singleton
2134Gemella moribillum(1) singleton
122Haladaptatus paucihalophilus(3) clique1000.97
510Helicobacter suis(2) clique99.720.91
1073Kingella denitrificans(1) singleton
442Lactobacillus oris(2) clique98.320.86
4384Lautropia mirabilis(1) singleton
2636Megasphaera micronuciformis(1) singleton
2267Neisseria mucosa(1) singleton
1083Oscillochloris trichoides(1) singleton
3663Paenibacillus larvae(1) singleton
4873Paenibacillus vortex(1) singleton
2761Peptoniphilus harei(1) singleton
3117Phascolarctobacterium sp.(1) singleton
1608Planococcus donghaensis(1) singleton
694Porphyromonas asaccharolytica(2) clique98.560.91
4886Prevotella multiformis(1) singleton
920Prevotella oralis(2) clique99.890.97
4326Prevotella salivae(1) singleton
1248Pseudomonas fluorescens(1) singleton
4830Pseudonocardia sp.(1) singleton
2541Pseudoramibacter alactolyticus(1) singleton
961Ralstonia sp.(2) clique1000.96
3801Segniliparus rugosus(1) singleton
498Selenomonas artemidis(2) clique97.340.88
197Selenomonas sp.(2) clique97.010.83
910Solobacterium moorei(2) clique97.790.7
803Streptococcus anginosus(2) clique97.40.89
239Streptococcus anginosus(2) clique96.660.83
606Streptococcus australis(2) clique99.990.96
195Streptococcus cristatus(2) clique99.970.96
882Streptococcus downei(1) Streptococcus sobrinus(4) clique98.20.86
953Streptococcus bovis(2) Streptococcus equinus(1) clique97.560.86
637Streptococcus infantis(2) clique99.990.95
1438Streptococcus infantis(1) singleton
2822Streptococcus parasanguinis(1) singleton
3646Streptococcus parasanguinis(1) singleton
4050Streptococcus peroris(1) singleton
215Streptococcus pseudoporcinus(2) clique99.840.97
1907Streptococcus sanguinis(1) singleton
3591Streptococcus sanguinis(1) singleton
557Streptococcus vestibularis(2) clique98.460.83
1267Succinatimonas hippei(1) singleton
669Sutterella wadsworthensis(2) clique98.230.88
1556Synechococcus sp.(1) singleton
3923Synechococcus sp.(1) singleton
3413Treponema phagedenis(1) singleton
1332Veillonella sp.(1) singleton
3523Vibrio brasiliensis(1) singleton
2086Vibrio caribbenthicus(1) singleton
3126Vibrio sinaloensis(1) singleton
2004Bacteriovorax marinus(1) singleton
1763Butyrivibrio fibrisolvens(1) singleton
628Chlamydia psittaci(28) Chlamydophila psittaci(9) clique99.450.94
1725Coprococcus catus(1) singleton
92Enterobacter hormaechei(2) Enterobacter cloacae(3) Enterobacter cancerogenus(1) clique98.690.82
3479Eubacterium cylindroides(1) singleton
3350Faecalibacterium prausnitzii(1) singleton
1249Haemophilus parainfluenzae(1) singleton
3521Halanaerobium praevalens(1) singleton
4508Helicobacter pylori(1) singleton
2303Helicobacter pylori(1) singleton
566Helicobacter pylori(2) clique96.90.87
2837Megamonas hypermegale(1) singleton
2452Ruminococcus bromii(1) singleton
1522Ruminococcus obeum(1) singleton
972Ruminococcus sp.(1) Blautia sp.(1) clique98.370.61
4056Ruminococcus sp.(1) singleton
1137Ruminococcus torques(1) singleton
3895Sphaerochaeta globosa(1) singleton
1254Vulcanisaeta moutnovskia(1) singleton
1607Weeksella virosa(1) singleton
3766unclassified(1) singleton
4291Marinobacter adhaerens(1) singleton
1224Victivallis vadensis(1) singleton
4157Acidianus hospitalis(1) singleton
2873Acidovorax avenae(1) singleton
3003Aerococcus urinae(1) singleton
474Aeromonas veronii(5) clique970.89
275Agrobacterium tumefaciens(2) Agrobacterium sp.(2) clique98.590.87
4121Amycolicicoccus subflavus(1) singleton
518Bacillus coagulans(5) clique98.830.85
2362Blattabacterium sp.(1) singleton
1672Buchnera aphidicola(1) singleton
659Burkholderia gladioli(2) clique99.320.78
4312Burkholderia rhizoxinica(1) singleton
1255Candidatus Midichloria mitochondrii(1) singleton
723Candidatus Moranella endobia(2) clique99.960.97
1969Candidatus Pelagibacter sp.(1) singleton
932Candidatus Tremblaya princeps(2) clique1000.81
1659Capnocytophaga canimorsus(1) singleton
4571Carnobacterium sp.(1) singleton
603Chlamydophila pecorum(1) Chlamydia pecorum(3) clique99.080.98
458Clostridium botulinum(3) clique99.890.83
1794Cellulosilyticum lentocellum(1) singleton
4611Clostridium sp.(1) singleton
1337Collimonas fungivorans(1) singleton
1271Corynebacterium resistens(1) singleton
635Corynebacterium ulcerans(3) clique98.80.93
4578Cupriavidus necator(1) singleton
4146Desulfotomaculum ruminis(1) singleton
2485Eggerthella sp.(1) singleton
262Enterobacter aerogenes(3) clique98.80.87
3475Francisella sp.(1) singleton
132Gallibacterium anatis(2) clique96.940.77
448Glaciecola chathamensis(1) Glaciecola agarilytica(2) clique98.60.85
4795Helicobacter bizzozeronii(1) singleton
461Hyphomicrobium sp.(2) clique99.510.85
4263Krokinobacter diaphorus(1) singleton
2028Lacinutrix algicola(1) singleton
154Lactobacillus acidophilus(3) Lactobacillus amylovorus(2) clique99.10.81
1232Lactobacillus kefiranofaciens(1) singleton
413Lactobacillus reuteri(2) clique1000.87
947Melissococcus plutonius(2) clique99.490.84
3650Metallosphaera cuprina(1) singleton
1428Methanobacterium sp.(1) singleton
3006Methanobacterium sp.(1) singleton
4893Methanosaeta concilii(1) singleton
2730Methanothermococcus okinawensis(1) singleton
4471Methanotorris igneus(1) singleton
2305Microbacterium testaceum(1) singleton
4057Microlunatus phosphovorus(1) singleton
3687Mycobacterium sp.(1) singleton
913Mycoplasma suis(2) clique97.990.83
2855Myxococcus fulvus(1) singleton
4600Nitrosomonas sp.(1) singleton
1313Nitrosomonas sp.(1) singleton
3062unclassified(1) singleton
271Oligotropha carboxidovorans(3) clique1000.94
512Paenibacillus mucilaginosus(3) clique99.010.89
456Prevotella denticola(3) clique98.220.84
111Pseudomonas fluorescens(1) Pseudomonas brassicacearum(2) Pseudomonas sp.(1) clique99.580.91
265Pseudomonas sp.(1) Pseudomonas mendocina(1) clique97.840.9
787Pseudomonas putida(2) clique97.690.83
1039Pusillimonas sp.(1) singleton
3798Pyrococcus sp.(1) singleton
2481Pyrococcus yayanosii(1) singleton
4235Ramlibacter tataouinensis(1) singleton
716Salmonella bongori(2) clique99.430.89
1065Simkania negevensis(1) singleton
3617Streptococcus oralis(1) singleton
123Streptococcus parasanguinis(3) clique96.810.85
394Streptococcus parauberis(5) clique99.30.83
209Streptococcus salivarius(2) clique97.470.88
745Tepidanaerobacter acetatoxydans(1) Tepidanaerobacter sp.(1) clique99.970.92
3915Thermoanaerobacterium xylanolyticum(1) singleton
2629Thermococcus barophilus(1) singleton
4423Thermococcus sp.(1) singleton
1096Thermoproteus uzoniensis(1) singleton
2889Treponema azotonutricium(1) singleton
2440Treponema brennaborense(1) singleton
4813Treponema primitia(1) singleton
2567Verrucosispora maris(1) singleton
831Vibrio ordalii(6) Vibrio anguillarum(2) Listonella anguillarum(2) clique group98.140.82
652Weissella koreensis(2) clique98.930.78
3702Zymomonas mobilis(1) singleton
185Francisella novicida(1) Francisella hispaniensis(1) clique97.980.89
1052Pseudonocardia dioxanivorans(1) singleton
4820Streptococcus salivarius(1) singleton
3420Asticcacaulis biprosthecum(1) singleton
1511Brevundimonas diminuta(1) singleton
2120Clostridium sp.(1) singleton
2544Photobacterium leiognathi(1) singleton
4652Candidatus Serratia symbiotica(1) singleton
482Streptococcus salivarius(1) Streptococcus sp.(1) clique97.020.77
3780Streptococcus sp.(1) singleton
1517Streptococcus sp.(1) singleton
4812Acetobacter pomorum(1) singleton
2151Acetobacter tropicalis(1) singleton
3229Acetonema longum(1) singleton
1455Actinomyces sp.(1) singleton
2187Actinomyces sp.(1) singleton
4403Aeromonas caviae(1) singleton
2307Bacteroides clarus(1) singleton
4505Bacteroides fluxus(1) singleton
552unclassified(1) Afipia clevelandensis(1) clique97.660.88
441Brevibacillus laterosporus(2) clique98.820.89
4091Caldalkalibacillus thermarum(1) singleton
2943Candidatus Nitrosoarchaeum limnia(1) singleton
130Capnocytophaga sp.(1) Paraprevotella clara(1) clique99.990.62
3404Capnocytophaga sp.(1) singleton
1216Centipeda periodontii(1) singleton
1761Corynebacterium bovis(1) singleton
3495unclassified(1) singleton
4036Dysgonomonas gadei(1) singleton
119Dysgonomonas mossii(2) clique1000.99
3411Enterobacter hormaechei(1) singleton
222Enterococcus faecalis(1) Enterococcus faecium(1) Enterococcus casseliflavus(1) Enterococcus sp.(1) clique98.680.8
3365Fructobacillus fructosus(1) singleton
4214Gemella haemolysans(1) singleton
1694Gemella sanguinis(1) singleton
3861Gluconacetobacter sp.(1) singleton
1161Gordonia neofelifaecis(1) singleton
4749Haemophilus parainfluenzae(1) singleton
4008Halomonas sp.(1) singleton
2684Haloplasma contractile(1) singleton
4770Halorhabdus tiamatea(1) singleton
1069Hylemonella gracilis(1) singleton
472Kingella kingae(3) clique98.460.9
4366unclassified(1) singleton
2249unclassified(1) singleton
2508unclassified(1) singleton
296unclassified(2) Coprococcus sp.(2) clique98.590.77
1327unclassified(1) singleton
3022Lactobacillus animalis(1) singleton
517Lactobacillus coryniformis(3) clique98.020.73
2035Lactobacillus farciminis(1) singleton
4252Lactobacillus fructivorans(1) singleton
3893Leuconostoc argentinum(1) singleton
2053Leuconostoc kimchii(1) singleton
666Leuconostoc gelidum(2) clique99.120.93
4347Methylophaga aminisulfidivorans(1) singleton
891Methyloversatilis universalis(2) clique1000.97
541Neisseria sp.(1) Neisseria macacae(1) clique96.810.82
1596unclassified(1) singleton
334Novosphingobium nitrogenifigens(2) clique1000.96
4322Oribacterium sp.(1) singleton
391Paenibacillus sp.(2) clique1000.97
923Paracoccus sp.(2) clique99.370.89
1242Paraprevotella xylaniphila(1) singleton
2531Parvimonas sp.(1) singleton
1512unclassified(1) singleton
417Hallella seregens(1) Prevotella dentalis(2) clique99.250.9
335Prevotella nigrescens(2) clique98.070.79
2065Prevotella pallens(1) singleton
4880Pseudoalteromonas haloplanktis(1) singleton
2210Psychrobacter sp.(1) singleton
124Rubrivivax benzoatilyticus(2) clique1000.96
1720Salinisphaera shabanensis(1) singleton
4809Shewanella sp.(1) singleton
1051unclassified(1) singleton
833Streptococcus anginosus(2) clique99.990.97
2185Streptococcus infantis(1) singleton
1999Streptococcus porcinus(1) singleton
3315Streptococcus sp.(1) singleton
2131Streptomyces griseoaurantiacus(1) singleton
3631Weissella cibaria(1) singleton
616Xanthomonas sp.(1) Xanthomonas perforans(1) clique1000.98
308Xanthomonas sp.(1) Xanthomonas vesicatoria(1) clique1000.99
1390unclassified(1) singleton
3640unclassified(1) singleton
3668unclassified(1) singleton
2476unclassified(1) singleton
179unclassified(2) clique99.990.93
228Rhizobium sp.(3) clique98.450.86
318Pseudomonas sp.(4) Pseudomonas umsongensis(1) Pseudomonas mandelii(1) clique97.680.89
3397unclassified(1) singleton
1334unclassified(1) singleton
4440unclassified(1) singleton
112unclassified(2) clique98.080.65
2441unclassified(1) singleton
2642unclassified(1) singleton
3731Flavobacterium sp.(1) singleton
2486unclassified(1) singleton
1748unclassified(1) singleton
3717unclassified(1) singleton
2022unclassified(1) singleton
4301unclassified(1) singleton
2558unclassified(1) singleton
1426unclassified(1) singleton
1754unclassified(1) singleton
2217unclassified(1) singleton
922unclassified(2) clique97.160.81
3121unclassified(1) singleton
2553unclassified(1) singleton
3776unclassified(1) singleton
1959unclassified(1) singleton
3099unclassified(1) singleton
3639unclassified(1) singleton
1574unclassified(1) singleton
3348unclassified(1) singleton
4757unclassified(1) singleton
2576unclassified(1) singleton
375unclassified(2) clique99.110.65
2040unclassified(1) singleton
3539unclassified(1) singleton
1893unclassified(1) singleton
2976unclassified(1) singleton
1294unclassified(1) singleton
3935unclassified(1) singleton
3054unclassified(1) singleton
4847unclassified(1) singleton
3902unclassified(1) singleton
1734unclassified(1) singleton
3327unclassified(1) singleton
2879unclassified(1) singleton
2948unclassified(1) singleton
3600unclassified(1) singleton
2804unclassified(1) singleton
1789Dehalobacter sp.(1) singleton
2463Mastigocoleus testarum(1) singleton
545unclassified(4) clique99.840.71
1977unclassified(1) singleton
4612unclassified(1) singleton
2327unclassified(1) singleton
3137unclassified(1) singleton
1101unclassified(1) singleton
3388unclassified(1) singleton
1708unclassified(1) singleton
4934unclassified(1) singleton
1043unclassified(1) singleton
4198unclassified(1) singleton
2539unclassified(1) singleton
3719unclassified(1) singleton
2502unclassified(1) singleton
4262unclassified(1) singleton
3174unclassified(1) singleton
4899unclassified(1) singleton
1293unclassified(1) singleton
2958unclassified(1) singleton
3803unclassified(1) singleton
4134unclassified(1) singleton
2401unclassified(1) singleton
1487unclassified(1) singleton
3662unclassified(1) singleton
8unclassified(3) clique group99.460.66
2496unclassified(1) singleton
4289unclassified(1) singleton
2107unclassified(1) singleton
3873unclassified(1) singleton
1670unclassified(1) singleton
3377unclassified(1) singleton
4782unclassified(1) singleton
4010unclassified(1) singleton
2592unclassified(1) singleton
3132unclassified(1) singleton
2285unclassified(1) singleton
4459unclassified(1) singleton
3562unclassified(1) singleton
537unclassified(10) clique group99.720.66
3612unclassified(1) singleton
4293unclassified(1) singleton
4936unclassified(1) singleton
3791unclassified(1) singleton
1018unclassified(1) singleton
1562unclassified(1) singleton
4944unclassified(1) singleton
3171unclassified(1) singleton
2497unclassified(1) singleton
4210unclassified(1) singleton
309unclassified(2) clique99.990.63
1342unclassified(1) singleton
3080unclassified(1) singleton
424unclassified(2) clique99.980.6
3502unclassified(1) singleton
2536unclassified(1) singleton
4138unclassified(1) singleton
2932unclassified(1) singleton
4885unclassified(1) singleton
2350unclassified(1) singleton
4507unclassified(1) singleton
1044unclassified(1) singleton
3259unclassified(1) singleton
4896unclassified(1) singleton
2479unclassified(1) singleton
3023unclassified(1) singleton
4674unclassified(1) singleton
4915unclassified(1) singleton
1421unclassified(1) singleton
3966unclassified(1) singleton
1861unclassified(1) singleton
4651unclassified(1) singleton
2287unclassified(1) singleton
1400unclassified(1) singleton
3215unclassified(1) singleton
1559unclassified(1) singleton
1707unclassified(1) singleton
4202unclassified(1) singleton
4756unclassified(1) singleton
1742unclassified(1) singleton
592unclassified(6) clique group99.240.61
4249unclassified(1) singleton
4763unclassified(1) singleton
1103unclassified(1) singleton
3629unclassified(1) singleton
1457unclassified(1) singleton
2254unclassified(1) singleton
2779unclassified(1) singleton
4534unclassified(1) singleton
1743unclassified(1) singleton
1190unclassified(1) singleton
3809unclassified(1) singleton
1091unclassified(1) singleton
3254unclassified(1) singleton
4436unclassified(1) singleton
2915unclassified(1) singleton
3072unclassified(1) singleton
4778unclassified(1) singleton
2557unclassified(1) singleton
4209unclassified(1) singleton
2102unclassified(1) singleton
4288unclassified(1) singleton
3271unclassified(1) singleton
2561unclassified(1) singleton
3700unclassified(1) singleton
1062unclassified(1) singleton
4295unclassified(1) singleton
3513unclassified(1) singleton
4906unclassified(1) singleton
2177unclassified(1) singleton
4281unclassified(1) singleton
2059unclassified(1) singleton
4824unclassified(1) singleton
2578unclassified(1) singleton
1201unclassified(1) singleton
4773unclassified(1) singleton
1950unclassified(1) singleton
708unclassified(2) clique99.840.81
4663unclassified(1) singleton
3219unclassified(1) singleton
2050unclassified(1) singleton
3751unclassified(1) singleton
4062unclassified(1) singleton
2833unclassified(1) singleton
3549unclassified(1) singleton
2027unclassified(1) singleton
1815unclassified(1) singleton
4681unclassified(1) singleton
2515unclassified(1) singleton
2459unclassified(1) singleton
2398unclassified(1) singleton
2601unclassified(1) singleton
347unclassified(2) clique99.680.72
1341unclassified(1) singleton
3073unclassified(1) singleton
1984unclassified(1) singleton
3503unclassified(1) singleton
3677unclassified(1) singleton
2411unclassified(1) singleton
4196unclassified(1) singleton
2949unclassified(1) singleton
2774unclassified(1) singleton
4464unclassified(1) singleton
3933unclassified(1) singleton
1292unclassified(1) singleton
3398unclassified(1) singleton
2679unclassified(1) singleton
2904unclassified(1) singleton
3989unclassified(1) singleton
2260unclassified(1) singleton
3774unclassified(1) singleton
931unclassified(2) clique99.960.72
1958unclassified(1) singleton
1273Candidatus Pelagibacter ubique(1) singleton
2952Candidatus Poribacteria sp.(1) singleton
1823Candidatus Poribacteria sp.(1) singleton
3517Candidatus Poribacteria sp.(1) singleton
4087unclassified(1) singleton
4557unclassified(1) singleton
2581unclassified(1) singleton
2160unclassified(1) singleton
1027Lactobacillus reuteri(1) singleton
4035Spirochaeta aurantia(1) singleton
2602Dinoroseobacter shibae(1) singleton
431Burkholderia sp.(1) Burkholderia tuberum(1) clique97.140.68
139Burkholderia sp.(2) clique98.840.85
4545Burkholderia unamae(1) singleton
1857Palaeococcus ferrophilus(1) singleton
158Prevotella intermedia(3) clique97.880.78
1396Fremyella diplosiphon(1) singleton
2259Dethiosulfovibrio peptidovorans(1) singleton
4105Colwellia sp.(1) singleton
2359Psychromonas sp.(1) singleton
4658Shewanella benthica(1) singleton
2517Moritella sp.(1) singleton
3551Carnobacterium sp.(1) singleton
3313Photobacterium profundum(1) singleton
4561unclassified(1) singleton
385Bacillus sp.(2) clique99.990.95
4028Chlorobaculum limnaeum(1) singleton
828Ornithobacterium rhinotracheale(2) clique99.960.91
1320Desulfonispora thiosulfatigenes(1) singleton
2908Psychrobacter sp.(1) singleton
3138uncultured archaeon sp.(1) singleton
3412unclassified(1) singleton
3550unclassified(1) singleton
2306unclassified(1) singleton
4107Thermus brockianus(1) singleton
432Halococcus hamelinensis(2) clique99.990.84
3665Labrenzia sp.(1) singleton
983Arcobacter sp.(2) clique1000.98
4521Phaeobacter sp.(1) singleton
3615unclassified(1) singleton
4810Prosthecomicrobium hirschii(1) singleton
3459Desulfosarcina variabilis(1) singleton
1967Desulfonema limicola(1) singleton
1496Hymenobacter roseosalivarius(1) singleton
2083Candidatus Nanosalinarum sp.(1) singleton
4704Vibrio navarrensis(1) singleton
3162Halomonas sp.(1) singleton
2973Pontibacter actiniarum(1) singleton
1150Beggiatoa sp.(1) singleton
2030Aminomonas paucivorans(1) singleton
1716Methanosalsum zhilinae(1) singleton
3001unclassified(1) singleton
430Desulfatibacillum alkenivorans(1) Desulfatibacillum aliphaticivorans(1) clique97.530.86
1531unclassified(1) singleton
3410unclassified(1) singleton
2712unclassified(1) singleton
4518Sphaerotilus natans(1) singleton
4200Mesorhizobium opportunistum(1) singleton
3139Virgibacillus sp.(1) singleton
481Clostridium pasteurianum(1) Clostridium sp.(1) clique99.990.94
2242Bdellovibrio bacteriovorus(1) singleton
547Planktothrix prolifica(1) Planktothrix Planktothrix(2) Planktothrix rubescens(1) Planktothrix unclassified(2) Planktothrix agardhii(2) Planktothrix sp.(3) clique98.020.81
939unclassified(1) Chloroflexus sp.(1) clique99.990.98
570Bacillus coagulans(3) clique98.340.88
2270Candidatus Pelagibacter sp.(1) singleton
4374unclassified(1) singleton
1877unclassified(1) singleton
3399unclassified(1) singleton
3886Candidatus Pelagibacter ubique(1) singleton
4407Cyanobacterium stanieri(1) singleton
3737Thermotoga thermarum(1) singleton
4315Mahella australiensis(1) singleton
4819Coriobacterium glomerans(1) singleton
4744Thermanaeromonas toyohensis(1) singleton
1113Geitlerinema sp.(1) singleton
4843Chroococcidiopsis thermalis(1) singleton
142Thermoanaerobacter siderophilus(1) Thermoanaerobacter wiegelii(1) Thermoanaerobacter indiensis(1) Thermoanaerobacter sp.(1) Thermoanaerobacter ethanolicus(1) clique98.230.79
3667Halothece sp.(1) singleton
918unclassified(2) clique1000.96
4826Pseudomonas fluorescens(1) singleton
4656Hyphomicrobium sulfonivorans(1) singleton
2927Desulfococcus oleovorans(1) singleton
3249Clostridium ragsdalei(1) singleton
1277Fluviicola taffensis(1) singleton
2990Nostoc sp.(1) singleton
1204Cyanobacterium aponinum(1) singleton
2649unclassified(1) singleton
1035unclassified(1) singleton
257Thermogladius shockii(1) Thermogladius cellulolyticus(1) clique1000.98
2198Desulfovibrio sp.(1) singleton
927Desulfovibrio africanus(2) clique97.760.88
1541Gloeocapsa sp.(1) singleton
1115Stanieria cyanosphaera(1) singleton
3781Thermobifida cellulosilytica(1) singleton
3336Prevotella multisaccharivorax(1) singleton
2986Leptolyngbya sp.(1) singleton
3670Bacillus simplex(1) singleton
3396Sphaerochaeta coccoides(1) singleton
2076Sphingobium chlorophenolicum(1) singleton
1961Polynucleobacter necessarius(1) singleton
3141Oscillatoria nigro-viridis(1) singleton
1399Calothrix sp.(1) singleton
1363Granulicella mallensis(1) singleton
2757Bacteroides coprosuis(1) singleton
657unclassified(2) clique1000.99
4238unclassified(1) singleton
1996Peptoniphilus asaccharolyticus(1) singleton
2375Anabaena cylindrica(1) singleton
1825Hippea maritima(1) singleton
2464Archaeoglobus veneficus(1) singleton
2104Desulfobacca acetoxidans(1) singleton
2006Alteromonas taeanensis(1) singleton
3595Acidilobus sulfurireducens(1) singleton
3793Pseudanabaena sp.(1) singleton
4156Treponema succinifaciens(1) singleton
2461Flavobacterium sp.(1) singleton
4560Flavobacterium sp.(1) singleton
3064Marinomonas sp.(1) singleton
2043unclassified(1) singleton
4766Synechococcus sp.(1) singleton
1412Marinithermus hydrothermalis(1) singleton
3816Candidatus Rhodoluna lacicola(1) singleton
4706Pseudanabaena sp.(1) singleton
2589Crinalium epipsammum(1) singleton
1688Candidatus Caldiarchaeum subterraneum(1) singleton
3408Pseudomonas fluorescens(1) singleton
3421Haliscomenobacter hydrossis(1) singleton
2505Thermodesulfobium narugense(1) singleton
1923unclassified(1) singleton
4502Roseobacter RCA(1) singleton
261Francisella noatunensis(5) clique99.830.93
1960Piscirickettsia salmonis(1) singleton
667Fangia hongkongiensis(1) Fangia hongkongensis(1) clique1000.99
248Lactobacillus buchneri(4) clique98.160.9
344Streptomyces cattleya(3) clique99.980.95
4723Methylomonas methanica(1) singleton
419Ochrobactrum sp.(1) Ochrobactrum intermedium(1) clique1000.99
312Paenibacillus barengoltzii(2) Paenibacillus sp.(5) clique98.950.93
277Isoptericola variabilis(3) clique99.680.94
776Paracoccus sp.(3) clique99.730.9
760Clostridium sp.(1) Candidatus Arthromitus sp.(5) clique99.950.94
670Microcoleus vaginatus(2) clique99.970.94
1992Pseudoalteromonas flavipulchra(1) singleton
3164Pseudoalteromonas sp.(1) singleton
1409Pseudoalteromonas luteoviolacea(1) singleton
1118Hyphomicrobium sp.(1) singleton
4377Thermodesulfatator indicus(1) singleton
2125Thermovirga lienii(1) singleton
3498Polynucleobacter necessarius(1) singleton
3428Pseudomonas syringae(1) singleton
256Pseudomonas syringae(3) Pseudomonas cannabina(3) clique99.880.86
183Pseudomonas syringae(3) clique99.250.84
619Pseudomonas avellanae(2) Pseudomonas sp.(1) Pseudomonas syringae(23) clique98.260.82
605Pseudomonas syringae(13) clique group97.520.83
494Blattabacterium sp.(2) clique1000.97
4513Pyrolobus fumarii(1) singleton
1408Treponema caldaria(1) singleton
3098Muricauda ruestringensis(1) singleton
3674Flexistipes sinusarabici(1) singleton
1417Thioalkalimicrobium cyclicum(1) singleton
4474Cellulomonas gilvus(1) singleton
462Fischerella thermalis(1) Fischerella sp.(1) clique99.880.96
4752Chroococcidiopsis sp.(1) singleton
4330Runella slithyformis(1) singleton
2209Rubrobacter radiotolerans(1) singleton
4933Calothrix sp.(1) singleton
647Aminobacter sp.(3) clique99.080.91
575Cellulosimicrobium cellulans(4) clique99.980.98
4402Cupriavidus gilardii(1) singleton
118Gordonia namibiensis(1) Gordonia westfalica(1) clique97.20.84
975Luteimonas sp.(2) clique99.970.96
2087Mesorhizobium sp.(1) singleton
499Nocardioides sp.(2) clique99.030.88
2239Schmidhempelia bombi(1) singleton
945Pseudoxanthomonas taiwanensis(1) Pseudoxanthomonas sp.(2) clique99.40.91
365Rhodococcus rhodochrous(2) clique99.150.86
3779Rhodococcus rhodochrous(1) singleton
1505Rhodococcus sp.(1) singleton
790Hydrogenobaculum sp.(4) clique1000.99
3991Methanocella arvoryzae(1) singleton
1867Methanocella paludicola(1) singleton
346Rhodothermus marinus(2) clique1000.99
3127unclassified(1) singleton
784Pseudomonas sp.(3) Pseudomonas fulva(1) clique97.160.92
3764Pseudomonas agarici(1) singleton
1610Pseudomonas fluorescens(1) singleton
2617Cellulomonas flavigena(1) singleton
191Desulfotomaculum carboxydivorans(1) Desulfotomaculum nigrificans(1) clique99.340.82
1827Acidobacterium unclassified(1) singleton
3363Marinomonas mediterranea(1) singleton
2604Marinomonas posidonica(1) singleton
395Sulfobacillus thermosulfidooxidans(2) clique98.960.83
2972Pseudomonas fluorescens(1) singleton
4693Pseudomonas fluorescens(1) singleton
4274Pseudomonas fluorescens(1) singleton
1924Ehrlichia muris(1) singleton
1864Lactobacillus reuteri(1) singleton
2428Frankia sp.(1) singleton
3756Spirochaeta thermophila(1) singleton
1057Cyclobacterium marinum(1) singleton
3274Caldithrix abyssi(1) singleton
2704Methanoplanus limicola(1) singleton
4895Lyngbya majuscula(1) singleton
2426Emticicia oligotrophica(1) singleton
4597Anabaena sp.(1) singleton
4737Stenotrophomonas maltophila(1) singleton
1410Spirulina subsalsa(1) singleton
2571Thermodesulfobacterium geofontis(1) singleton
4816Turneriella parva(1) singleton
4296Spirulina major(1) singleton
916Sulfobacillus acidophilus(2) clique1000.93
3648Niastella koreensis(1) singleton
2542Mucilaginibacter paludis(1) singleton
959Dechloromonas agitata(2) clique98.950.79
1675Dechloromonas sp.(1) singleton
3840Moorella perchloratireducens(1) singleton
3172Halopiger xanaduensis(1) singleton
1437Enterobacter cloacae(1) singleton
4767Rahnella aquatilis(1) singleton
2166Methanotorris formicicus(1) singleton
1074Chloroflexus sp.(1) singleton
872Rhodanobacter sp.(4) clique98.530.86
356Thioalkalivibrio thiocyanoxidans(1) Thioalkalivibrio paradoxus(1) clique1000.88
1573Natronococcus occultus(1) singleton
1028Aquiflexum balticum(1) singleton
3266Bacillus sp.(1) singleton
3406Synechococcus sp.(1) singleton
2612Thiothrix nivea(1) singleton
636Myroides odoratus(1) Myroides odoratimimus(1) clique99.990.97
2244Oceanimonas doudoroffii(1) singleton
3554Niabella soli(1) singleton
4112Halovivax ruber(1) singleton
2326Leptonema illini(1) singleton
4011Candidatus Frankia datiscae(1) singleton
4443Mycobacterium chubuense(1) singleton
680Pseudomonas syringae(2) clique99.180.89
707Pseudomonas syringae(3) clique99.140.85
917Pseudomonas syringae(2) clique99.20.9
449Pseudomonas viridiflava(3) clique96.960.91
1379Halobaculum sp.(1) singleton
715Geobacillus debilis(2) clique99.070.84
1433Brenneria salicis(1) singleton
4461Hyphomicrobium denitrificans(1) singleton
71Paenibacillus lactis(1) Bacillus sp.(1) clique98.30.86
1372Halobacterium sp.(1) singleton
4797Mycobacterium rhodesiae(1) singleton
4180unclassified(1) singleton
2389unclassified(1) singleton
3515unclassified(1) singleton
1860Gillisia limnaea(1) singleton
2985Pseudanabaena sp.(1) singleton
4284Thioflavicoccus mobilis(1) singleton
3147Mycobacterium smegmatis(1) singleton
1403Desulfosporosinus acidiphilus(1) singleton
2000Thioalkalimicrobium aerophilum(1) singleton
2092Sulfurospirillum barnesii(1) singleton
1134Methanofollis liminatans(1) singleton
3757Fervidobacterium pennivorans(1) singleton
2957Pseudomonas stutzeri(1) singleton
2831Desulfitobacterium dichloroeliminans(1) singleton
2276Desulfitobacterium metallireducens(1) singleton
1296Pseudomonas syringae(1) singleton
4137Synechococcus sp.(1) singleton
2380Synechococcus sp.(1) singleton
3230Synechococcus sp.(1) singleton
3002Scytonema hofmanni(1) singleton
4098Methylosinus trichosporium(1) singleton
1826Wolbachia persica(1) singleton
702Desulfitobacterium dehalogenans(1) Desulfitobacterium sp.(1) clique99.250.9
3783Methanolinea tarda(1) singleton
2474unclassified(1) singleton
1931unclassified(1) singleton
3636Calothrix sp.(1) singleton
36Clostridium clariflavum(2) clique99.380.84
1851Synechococcus sp.(1) singleton
3524Bradyrhizobium sp.(1) singleton
2995Cronobacter sp.(1) singleton
4827Promicromonospora kroppenstedtii(1) singleton
266Rhizobium gallicum(1) Rhizobium leguminosarum(4) clique98.830.87
2989Dechlorobacter hydrogenophilus(1) singleton
1367Desulfosporosinus youngiae(1) singleton
2430Desulfotomaculum gibsoniae(1) singleton
1807Arcobacter sp.(1) singleton
4168Geobacillus sp.(1) singleton
2453Acidovorax temperans(1) singleton
644Pseudomonas sp.(1) Pseudomonas stutzeri(1) clique96.820.86
2824unclassified(1) singleton
455Azospira suillum(1) unclassified(1) clique98.390.88
3158Bradyrhizobium sp.(1) singleton
2921Methylomicrobium album(1) singleton
1193Cyanobium gracile(1) singleton
2492Saccharomonospora marina(1) singleton
4655Saccharomonospora cyanea(1) singleton
355Haloferax sulfurifontis(2) Haloferax denitrificans(2) clique98.130.89
414Haloarcula vallismortis(2) clique1000.97
104Haloferax mediterranei(1) Haloferax volcanii(2) clique1000.97
696Haloferax mucosum(2) clique1000.98
1689unclassified(1) singleton
1859Desulfobacterium postgatei(1) singleton
2748Bacillus sp.(1) singleton
3181Bordetella petrii(1) singleton
3374Bacillus sp.(1) singleton
202Paracoccus pantotrophus(2) clique99.760.85
4808Gloeocapsa sp.(1) singleton
2568Xenococcus sp.(1) singleton
3380Bacillus ginsengihumi(1) singleton
3908Desulfovibrio sp.(1) singleton
1974Frankia sp.(1) singleton
1344Burkholderia sp.(1) singleton
2001Synechococcus sp.(1) singleton
2150Bradyrhizobium sp.(1) singleton
4237Desulfovibrio termitidis(1) singleton
924Saccharomonospora azurea(2) clique99.320.85
150Thermus oshimai(2) clique98.820.84
3122Beggiatoa alba(1) singleton
1411Thiorhodovibrio sp.(1) singleton
3974Microvirga lupini(1) singleton
2991Thiocystis violascens(1) singleton
1350Mycobacterium tusciae(1) singleton
2643Methylocaldum szegediense(1) singleton
792unclassified(2) clique96.920.66
2720Thermanaerovibrio velox(1) singleton
1418Thermobacillus composti(1) singleton
1640Sphaerochaeta pleomorpha(1) singleton
4805Owenweeksia hongkongensis(1) singleton
3853Rhizobium leguminosarum(1) singleton
690Clostridium termitidis(2) clique1000.99
2532Methanoregula formicicum(1) singleton
2518Mycobacterium rhodesiae(1) singleton
4273Thiocapsa marina(1) singleton
3817Aciduliprofundum sp.(1) singleton
2070Ectothiorhodospira haloalkaliphila(1) singleton
1928Herpetosiphon aurantiacus(1) singleton
2335Bordetella petrii(1) singleton
2760Microvirga lotononidis(1) singleton
3173Deinococcus pimensis(1) singleton
779Pseudoxanthomonas suwonensis(3) clique97.960.91
1972Saccharomonospora glauca(1) singleton
2414Marinitoga piezophila(1) singleton
4942Ensifer terangae(1) singleton
2147Mesorhizobium sp.(1) singleton
1290Burkholderia dilworthii(1) singleton
2663Burkholderia sp.(1) singleton
1612Mesorhizobium sp.(1) singleton
4673Bradyrhizobium sp.(1) singleton
4325Desulfosporosinus orientis(1) singleton
4854unclassified(1) singleton
2608unclassified(1) singleton
1352unclassified(1) singleton
4834Eubacterium cellulosolvens(1) singleton
899Pseudomonas thermotolerans(2) clique99.440.92
4892Pseudoxanthomonas sp.(1) singleton
2689Chelativorans sp.(1) singleton
2887Ensifer sp.(1) singleton
1206Echinicola vietnamensis(1) singleton
1625Mesorhizobium australicum(1) singleton
3426Alkaliflexus imshenetskii(1) singleton
2495Joostella marina(1) singleton
3405Oscillatoria acuminata(1) singleton
1643Xylanibacter oryzae(1) singleton
2909Synechococcus sp.(1) singleton
4099Microcoleus sp.(1) singleton
205Rhizobium leguminosarum(2) clique98.670.88
2992Saprospira grandis(1) singleton
1491Thiorhodospira sibirica(1) singleton
969Rhizobium leguminosarum(2) clique98.790.94
1971Prochlorothrix hollandica(1) singleton
1016Oscillatoria sp.(1) singleton
56Burkholderia vietnamiensis(1) Burkholderia cepacia(1) clique97.740.77
1843Clostridium sp.(1) singleton
3649Rhizobium leguminosarum(1) singleton
1635Saccharomonospora xinjiangensis(1) singleton
3043Treponema saccharophilum(1) singleton
1200Dactylococcopsis salina(1) singleton
4786Spirochaeta africana(1) singleton
4414Belliella baltica(1) singleton
2196Flexibacter litoralis(1) singleton
4760Clostridium pasteurianum(1) singleton
2580Pleurocapsa sp.(1) singleton
4189Solitalea canadensis(1) singleton
2045Aequorivita sublithincola(1) singleton
1704Deinococcus hopiensis(1) singleton
3432Deinococcus peraridilitoris(1) singleton
2880Barnesiella viscericola(1) singleton
189Singulisphaera acidiphila(2) clique99.990.92
4175Methanomethylovorans hollandica(1) singleton
3964Anaerobaculum mobile(1) singleton
4478Pleurocapsa sp.(1) singleton
1246Pseudomonas fluorescens(1) singleton
1832Halobacteroides halobius(1) singleton
2261Desulfomonile tiedjei(1) singleton
2199Rikenella microfusus(1) singleton
4261Leptolyngbya sp.(1) singleton
2632unclassified(1) singleton
3316Cylindrospermum stagnale(1) singleton
1503Nodosilinea nodulosa(1) singleton
3718Microchaete sp.(1) singleton
4698Holophaga foetida(1) singleton
1112Thermaerobacter subterraneus(1) singleton
4840Leptolyngbya boryana(1) singleton
3614Nostoc sp.(1) singleton
4082Frateuria aurantia(1) singleton
203Alistipes finegoldii(1) Alistipes sp.(1) clique98.720.78
57Chlorogloeopsis sp.(1) Chlorogloeopsis fritschii(2) clique99.980.98
4705Cytophaga fermentans(1) singleton
3170Leptolyngbya sp.(1) singleton
4878Flectobacillus major(1) singleton
1514Jiangella gansuensis(1) singleton
1295Syntrophorhabdus aromaticivorans(1) singleton
4659Geminocystis herdmanii(1) singleton
651Natrinema pellirubrum(2) clique1000.91
4551Calothrix desertica(1) singleton
4388Frankia sp.(1) singleton
3810Halonatronum saccharophilum(1) singleton
2141Sediminibacterium sp.(1) singleton
4358Clostridium alkalicellulosi(1) singleton
67Arsenophonus nasoniae(1) Arsenophonus sp.(1) clique99.920.89
1042Arsenophonus triatominarum(1) singleton
3804Rivularia sp.(1) singleton
2676Caldisphaera lagunensis(1) singleton
3842unclassified(1) singleton
1674Geitlerinema sp.(1) singleton
4725Thiorhodococcus drewsii(1) singleton
2607Dehalobacter restrictus(1) singleton
3903Rhizobium leguminosarum(1) singleton
1402Meiothermus chliarophilus(1) singleton
3048Roseobacter litoralis(1) singleton
3340Desulfosporosinus meridiei(1) singleton
1599Burkholderia sprentiae(1) singleton
3891Methylocapsa acidiphila(1) singleton
2246Clostridium sp.(1) singleton
1217Marichromatium purpuratum(1) singleton
3269Halostagnicola larsenii(1) singleton
140Cloacibacillus evryensis(1) Synergistes sp.(1) clique98.940.79
604Pseudomonas psychrotolerans(1) Pseudomonas sp.(2) Pseudomonas oleovorans(1) clique98.030.93
1211Mesorhizobium ciceri(1) singleton
3092Actinospica robiniae(1) singleton
3806Patulibacter minatonensis(1) singleton
4883Cryptosporangium arvum(1) singleton
2093Caldanaerobius polysaccharolyticum(1) singleton
3438Mesotoga prima(1) singleton
4225Chamaesiphon minutus(1) singleton
1741Acidithiobacillus ferrivorans(1) singleton
815Actinopolyspora iraqiensis(1) Saccharomonospora paurometabolica(1) clique97.450.72
216Natronobacterium gregoryi(2) clique99.990.93
1386Octadecabacter antarcticus(1) singleton
4046Acetivibrio cellulolyticus(1) singleton
3419Candidatus Chlorothrix halophila(1) singleton
1338Rhizobium sp.(1) singleton
4321Terriglobus roseus(1) singleton
781Rhizobium leguminosarum(5) clique97.460.82
4811unclassified(1) singleton
3491Caulobacter sp.(1) singleton
1949unclassified(1) singleton
734Brevibacillus sp.(1) Brevibacillus agri(1) clique99.540.86
4411Rhizobium sp.(1) singleton
2009Rhizobium sp.(1) singleton
2031Chryseobacterium sp.(1) singleton
4256Acidovorax sp.(1) singleton
1637Polaromonas sp.(1) singleton
3818unclassified(1) singleton
405Pseudomonas sp.(2) clique96.610.86
199Pseudomonas sp.(3) clique98.130.88
2998Pseudomonas sp.(1) singleton
1481Pseudomonas sp.(1) singleton
1641Pseudomonas sp.(1) singleton
3931Pseudomonas sp.(1) singleton
1235Pseudomonas sp.(1) singleton
4481Pseudomonas sp.(1) singleton
4697Pseudomonas sp.(1) singleton
2123Pseudomonas sp.(1) singleton
3175Pseudomonas sp.(1) singleton
996Pseudomonas sp.(2) clique97.80.89
4661Pseudomonas sp.(1) singleton
1535Pseudomonas sp.(1) singleton
2161Pseudomonas sp.(1) singleton
1896Pseudomonas sp.(1) singleton
3548Pseudomonas sp.(1) singleton
1325Pantoea sp.(1) singleton
1053unclassified(1) singleton
3211Phyllobacterium sp.(1) singleton
1589Bradyrhizobium sp.(1) singleton
763Pseudomonas sp.(2) clique1000.98
2885Pantoea sp.(1) singleton
1912Candidatus Pelagibacter ubique(1) singleton
2263Candidatus Pelagibacter ubique(1) singleton
480Pelosinus sp.(1) Pelosinus fermentans(5) clique99.770.93
2793Adhaeribacter aquaticus(1) singleton
2759Thermococcus sp.(1) singleton
1432Pelagibacterium halotolerans(1) singleton
3190unclassified(1) singleton
3623Candidatus Arthromitus sp.(1) singleton
50Mycoplasma putrefaciens(2) clique99.10.9
4070Pseudovibrio sp.(1) singleton
1240Haloarcula hispanica(1) singleton
3472Micavibrio aeruginosavorus(1) singleton
1885Megasphaera elsdenii(1) singleton
240Ralstonia solanacearum(2) clique97.860.84
2472Filifactor alocis(1) singleton
1810Paenibacillus terrae(1) singleton
2685Glaciecola nitratireducens(1) singleton
3007Kitasatospora setae(1) singleton
2080Thermoproteus tenax(1) singleton
2475Listeria ivanovii(1) singleton
594Lactococcus garvieae(8) clique98.740.85
2871Flavobacterium branchiophilum(1) singleton
4755Borrelia burgdorferi(1) singleton
2293unclassified(1) singleton
2559Methanococcus maripaludis(1) singleton
3920Blattabacterium sp.(1) singleton
2711Corynebacterium variabile(1) singleton
2304Tetragenococcus halophilus(1) singleton
4042Pyrobaculum sp.(1) singleton
1944Lactobacillus sanfranciscensis(1) singleton
3975Flavobacterium columnare(1) singleton
718Streptococcus pseudopneumoniae(3) clique97.620.9
98Klebsiella sp.(1) Klebsiella oxytoca(3) clique98.340.84
270Taylorella asinigenitalis(2) clique98.310.9
3393Roseburia hominis(1) singleton
804Vibrio natriegens(1) Vibrio sp.(1) clique98.230.84
1649Oscillibacter valericigenes(1) singleton
3876Wigglesworthia glossinidia(1) singleton
483Helicobacter pylori(5) clique group96.630.91
454Streptomyces hygroscopicus(2) clique1000.97
3258Alicyclobacillus acidocaldarius(1) singleton
4342Burkholderia sp.(1) singleton
3872unclassified(1) singleton
1136Actinoplanes sp.(1) singleton
2408Pseudomonas fluorescens(1) singleton
1775Buchnera aphidicola(1) singleton
198Bacillus sp.(2) Bacillus megaterium(1) clique group97.290.89
1446Pediococcus claussenii(1) singleton
2179Staphylococcus aureus(1) singleton
3913Nocardia cyriacigeorgica(1) singleton
2376Thermus sp.(1) singleton
2175Brachyspira intermedia(1) singleton
3331Buchnera aphidicola(1) singleton
269Bradyrhizobium japonicum(3) clique98.190.89
4876Methanosaeta harundinacea(1) singleton
3146Azospirillum lipoferum(1) singleton
1824Azospirillum brasilense(1) singleton
2073Pseudomonas chlororaphis(1) singleton
4627Candidatus Chloracidobacterium thermophilum(1) singleton
1416Polymorphum gilvum(1) singleton
4093Oceanimonas sp.(1) singleton
2812Tannerella forsythensis(1) singleton
1558Pseudoxanthomonas spadix(1) singleton
3167Acetobacterium woodii(1) singleton
3870Citromicrobium sp.(1) singleton
3444Gordonia alkanivorans(1) singleton
2565Haemophilus haemolyticus(1) singleton
1603Haemophilus pittmaniae(1) singleton
4033Idiomarina sp.(1) singleton
2292unclassified(1) singleton
4452Mycobacterium colombiense(1) singleton
2950Mycoplasma anatis(1) singleton
4079Mycoplasma columbinum(1) singleton
3561Parvimonas sp.(1) singleton
4641Peptoniphilus sp.(1) singleton
1269Rheinheimera sp.(1) singleton
2183Sporosarcina newyorkensis(1) singleton
1441Streptococcus criceti(1) singleton
3214Streptococcus ictaluri(1) singleton
1751Streptococcus macacae(1) singleton
889Streptococcus urinalis(2) clique99.980.95
4152Veillonella sp.(1) singleton
3448Vibrio ichthyoenteri(1) singleton
1274Vibrio nigripulchritudo(1) singleton
492Vibrio sp.(1) Vibrio scophthalmi(1) clique97.070.82
725Vibrio tubiashii(2) clique99.980.95
3066Ensifer arboris(1) singleton
1762Phaeobacter caeruleus(1) singleton
3681unclassified(1) singleton
2742Methylophaga nitratireducens(1) singleton
4020Methylophaga frappieri(1) singleton
3814Leisingera methylohalidivorans(1) singleton
980Amycolatopsis thermoflava(1) Amycolatopsis methanolica(1) clique96.820.72
3787Amycolatopsis halophila(1) singleton
2575unclassified(1) singleton
4224Brevibacillus sp.(1) singleton
3453unclassified(1) singleton
521unclassified(1) Methylotenera sp.(1) clique98.310.9
1177Saprospira grandis(1) singleton
3909Blastococcus saxobsidens(1) singleton
373Gordonia polyisoprenivorans(3) clique98.50.83
3685Methanocella conradii(1) singleton
2903Deinococcus gobiensis(1) singleton
4368Helicobacter pylori(1) singleton
2072Corallococcus coralloides(1) singleton
4353Desulfurella acetivorans(1) singleton
1822Haloquadratum walsbyi(1) singleton
3557Haloquadratum walsbyi(1) singleton
1375Halonotius sp.(1) singleton
3130Halonotius sp.(1) singleton
2916Haloquadratum sp.(1) singleton
3362uncultured archaeon sp.(1) singleton
1169Halorubrum sp.(1) singleton
3697Thermocrinis ruber(1) singleton
3145Saccharibacillus sacchari(1) singleton
3238Mesorhizobium loti(1) singleton
4450Fischerella sp.(1) singleton
591Escherichia blattae(1) Shimwellia blattae(1) clique1000.95
1805Salinibacter sp.(1) singleton
988Bacteroides ovatus(2) clique1000.99
3542Nitriliruptor alkaliphilus(1) singleton
304Caldilinea aerophila(2) clique1000.96
3658Variovorax sp.(1) singleton
4329Flavobacterium sp.(1) singleton
2739Amycolatopsis sp.(1) singleton
353Burkholderia mimosarum(2) clique99.210.82
3492Rhizobium leguminosarum(1) singleton
1319Azorhizobium doebereinerae(1) singleton
384Rhizobium sp.(1) Rhizobium mesoamericanum(1) clique96.870.8
2449Mesorhizobium sp.(1) singleton
4144Bradyrhizobium japonicum(1) singleton
2790Rhizobium leguminosarum(1) singleton
4623Bradyrhizobium sp.(1) singleton
491Bradyrhizobium elkanii(2) clique1000.97
4125Bradyrhizobium elkanii(1) singleton
896Teredinibacter turnerae(4) Teredinibacter sp.(1) clique98.370.87
3957Bradyrhizobium elkanii(1) singleton
2975Bradyrhizobium japonicum(1) singleton
4590Bradyrhizobium sp.(1) singleton
2802Flavobacterium antarcticum(1) singleton
1078Massilia alkalitolerans(1) singleton
3308Budvicia aquatica(1) singleton
3726Ignatzschineria larvae(1) singleton
3664Alicyclobacillus pomorum(1) singleton
232Propionibacterium acidipropionici(2) clique99.240.9
4051Thermocrispum municipale(1) singleton
2088Glycomyces tenuis(1) singleton
4367Corynebacterium sputi(1) singleton
1598Thermocrispum agreste(1) singleton
3760Capnocytophaga cynodegmi(1) singleton
3283Nitritalea halalkaliphila(1) singleton
722Bradyrhizobium sp.(2) clique1000.97
7Bradyrhizobium elkanii(3) clique97.450.76
1691Rhizobium sp.(1) singleton
3833Bradyrhizobium japonicum(1) singleton
2864Bradyrhizobium sp.(1) singleton
1868Rhizobium sullae(1) singleton
4176Rhizobium mongolense(1) singleton
2402Mesorhizobium loti(1) singleton
3352Burkholderia sp.(1) singleton
4306Caloramator sp.(1) singleton
2090Bradyrhizobium sp.(1) singleton
4700Acetobacterium dehalogenans(1) singleton
2671Sedimenticola selenatireducens(1) singleton
1245Desulfosarcina sp.(1) singleton
1657Rhizobium giardinii(1) singleton
2670Bradyrhizobium japonicum(1) singleton
1056Cupriavidus sp.(1) singleton
3745Mesorhizobium loti(1) singleton
1614Cupriavidus taiwanensis(1) singleton
4418Burkholderia sp.(1) singleton
2530Helicobacter cetorum(1) singleton
4650Actinoplanes missouriensis(1) singleton
1461Fervidicoccus fontis(1) singleton
3111Bradyrhizobium sp.(1) singleton
2982Caldisericum exile(1) singleton
3633Stenotrophomonas maltophilia(1) singleton
3979Halobacillus halophilus(1) singleton
2429Helicobacter cetorum(1) singleton
3019Gluconacetobacter xylinus(1) singleton
785Rubrivivax gelatinosus(2) clique98.410.79
3342Rhodospirillum photometricum(1) singleton
1745Helicobacter pylori(1) singleton
3772Selenomonas ruminantium(1) singleton
4387Bacillus sp.(1) singleton
4717Helicobacter pylori(1) singleton
2710Ignavibacterium album(1) singleton
2922Candidatus Mycoplasma haemominutum(1) singleton
3723Bifidobacterium animalis(1) singleton
1728Mobilicoccus pelagius(1) singleton
1577unclassified(1) singleton
2623Haemophilus sp.(1) singleton
4269Corynebacterium casei(1) singleton
3168Prevotella oulorum(1) singleton
4831Bizionia argentinensis(1) singleton
2061Tannerella sp.(1) singleton
3694Bradyrhizobium sp.(1) singleton
105Eubacterium sp.(2) clique98.030.82
1601Neisseria shayeganii(1) singleton
4094Ruegeria sp.(1) singleton
3063Staphylococcus simiae(1) singleton
2650Johnsonella ignava(1) singleton
3485Clostridium hathewayi(1) singleton
4174Alistipes indistinctus(1) singleton
2415Flavobacterium frigoris(1) singleton
2446Odoribacter laneus(1) singleton
3945unclassified(1) singleton
3519Rothia aeria(1) singleton
1905Candidatus Aquiluna sp.(1) singleton
2839Wolbachia pipientis(1) singleton
1219Lactobacillus parafarraginis(1) singleton
2520Flavonifractor plautii(1) singleton
4709unclassified(1) singleton
861Rhodococcus imtechensis(1) Rhodococcus wratislaviensis(1) Rhodococcus opacus(2) clique group97.320.68
3805Treponema sp.(1) singleton
1557Pseudomonas sp.(1) singleton
1414unclassified(1) singleton
3039Paenibacillus dendritiformis(1) singleton
1783Desulfovibrio sp.(1) singleton
2436Ornithinibacillus sp.(1) singleton
4230Campylobacter sp.(1) singleton
3994Peptoniphilus indolicus(1) singleton
3148Lactobacillus mucosae(1) singleton
1463Lactobacillus versmoldensis(1) singleton
3601Lactobacillus acidipiscis(1) singleton
1942Mesorhizobium amorphae(1) singleton
3977Oribacterium sp.(1) singleton
2339Mycoplasma iowae(1) singleton
743Haemophilus parainfluenzae(1) Haemophilus sputorum(1) clique99.070.94
188Prevotella micans(2) clique1000.98
2923Subdoligranulum sp.(1) singleton
4102Bradyrhizobium sp.(1) singleton
2371Prevotella sp.(1) singleton
849Clostridium clostridioforme(8) clique99.530.87
2810Selenomonas infelix(1) singleton
2280Prevotella stercorea(1) singleton
4711Gordonia terrae(1) singleton
2079Gordonia sputi(1) singleton
3841Prevotella sp.(1) singleton
4758Achromobacter arsenitoxydans(1) singleton
2585Halomonas sp.(1) singleton
357Spiroplasma melliferum(2) clique99.890.81
2071unclassified(1) singleton
471Myroides odoratimimus(5) clique97.860.89
2021Roseomonas cervicalis(1) singleton
4548Acidovorax sp.(1) singleton
2737Nesterenkonia sp.(1) singleton
3179Fusobacterium sp.(1) singleton
1482Marinobacter manganoxydans(1) singleton
3932unclassified(1) singleton
4104Commensalibacter intestini(1) singleton
2133Cupriavidus basilensis(1) singleton
1572Dolosigranulum pigrum(1) singleton
4703Collinsella tanakaei(1) singleton
2128Lactobacillus kisonensis(1) singleton
3394Dialister succinatiphilus(1) singleton
956Prevotella maculosa(2) clique97.420.82
4643Mesorhizobium alhagi(1) singleton
285Mycoplasma canis(5) clique98.310.94
1358Citreicella sp.(1) singleton
3827Pantoea stewartii(1) singleton
1801Alishewanella jeotgali(1) singleton
949Eubacteriaceae bacterium sp.(1) Eubacterium sp.(1) clique98.240.78
2417Helcococcus kunzii(1) singleton
4154Facklamia languida(1) singleton
2874Olsenella sp.(1) singleton
4492Clostridium citroniae(1) singleton
2329Escherichia sp.(1) singleton
4024Streptococcus sp.(1) singleton
2163Streptococcus sp.(1) singleton
1706unclassified(1) singleton
3251Mycoplasma ovipneumoniae(1) singleton
329Lactobacillus mali(2) clique99.960.79
4858Lactobacillus suebicus(1) singleton
4785Lactobacillus malefermentans(1) singleton
3347Sutterella parvirubra(1) singleton
1731Nocardia brasiliensis(1) singleton
3904Streptococcus sp.(1) singleton
2069Prevotella sp.(1) singleton
4213Actinomyces graevenitzii(1) singleton
1167Hafnia alvei(1) singleton
3364unclassified(1) singleton
1746Lactobacillus zeae(1) singleton
360Elizabethkingia anophelis(2) clique99.980.96
2283unclassified(1) singleton
1898Sporolactobacillus inulinus(1) singleton
1366Eubacterium infirmum(1) singleton
4509Bacillus smithii(1) singleton
821Actinomyces sp.(1) Actinomyces johnsonii(2) clique97.870.86
3962Rhodococcus pyridinivorans(1) singleton
300Propionibacterium avidum(2) Propionibacterium sp.(1) clique group97.20.85
2197Prevotella histicola(1) singleton
3297Neisseria wadsworthii(1) singleton
1629Gluconobacter morbifer(1) singleton
921Oribacterium sp.(2) clique99.630.95
4204Acaryochloris sp.(1) singleton
1693Thermococcus litoralis(1) singleton
390Megamonas rupellensis(1) Megamonas funiformis(1) clique98.30.79
4069Nitratireductor aquibiodomus(1) singleton
3926Escherichia hermannii(1) singleton
3948Streptomyces sp.(1) singleton
4917Clostridium sp.(1) singleton
2666Prevotella nanceiensis(1) singleton
1547Ensifer fredii(1) singleton
3626Gordonia amarae(1) singleton
2439Gordonia otitidis(1) singleton
1041Methanolobus tindarius(1) singleton
3416Rhizobium leguminosarum(1) singleton
4123Amycolatopsis nigrescens(1) singleton
4549unclassified(1) singleton
3769Streptococcus merionis(1) singleton
1627Longispora albida(1) singleton
901Mycobacterium hassiacum(2) clique99.990.96
337Streptococcus massiliensis(2) clique1000.98
3176Corynebacterium ciconiae(1) singleton
2533Actinomycetospora chiangmaiensis(1) singleton
4307Catelliglobosispora koreensis(1) singleton
2089Actinoplanes globisporus(1) singleton
1539Corynebacterium lubricantis(1) singleton
3154Streptococcus marimammalium(1) singleton
4859Thiothrix disciformis(1) singleton
2386Oligella urethralis(1) singleton
4085Streptococcus entericus(1) singleton
1872Streptococcus ferus(1) singleton
3526Streptococcus ovis(1) singleton
1102Butyricimonas synergistica(1) singleton
2719Olivibacter sitiensis(1) singleton
4463Streptococcus didelphis(1) singleton
2379Corynebacterium doosanense(1) singleton
1311Lewinella cohaerens(1) singleton
443Enterococcus cecorum(2) clique1000.96
1889Amycolatopsis taiwanensis(1) singleton
3531Streptococcus caballi(1) singleton
3947unclassified(1) singleton
3216Anaerophaga thermohalophila(1) singleton
2582Anaerophaga thermohalophila(1) singleton
3868Anaerophaga sp.(1) singleton
1138Advenella kashmirensis(1) singleton
3641Corynebacterium caspium(1) singleton
3275Corynebacterium ulceribovis(1) singleton
3733Lewinella persica(1) singleton
1519Leptotrichia shahii(1) singleton
2616Prevotella paludivivens(1) singleton
4381Dasania marina(1) singleton
128Bacteroides massiliensis(2) clique99.990.98
3319Thiobacillus thioparus(1) singleton
1022Asticcacaulis benevestitus(1) singleton
4371Thiobacillus denitrificans(1) singleton
2228Martelella mediterranea(1) singleton
1597Meiothermus timidus(1) singleton
2126Marinobacter lipolyticus(1) singleton
4390Echinicola pacifica(1) singleton
3287Pontibacter roseus(1) singleton
626Enterococcus columbae(3) clique1000.98
3691Frankia sp.(1) singleton
4389Nocardiopsis sp.(1) singleton
2330Spirochaeta alkalica(1) singleton
4350Desulfurispora thermophila(1) singleton
2081Sinorhizobium meliloti(1) singleton
1818Streptococcus orisratti(1) singleton
1256Porphyromonas somerae(1) singleton
2959Porphyromonas levii(1) singleton
4909Thiothrix flexilis(1) singleton
2653Bradyrhizobium canariense(1) singleton
4941Lamprocystis purpurea(1) singleton
3200Leptotrichia wadei(1) singleton
4541Burkholderia sp.(1) singleton
706Salinispora pacifica(2) clique99.270.9
794Salinispora pacifica(17) clique98.670.84
1611Kiloniella laminariae(1) singleton
2688Corynebacterium mastitidis(1) singleton
3262Spirosoma luteum(1) singleton
204Salinispora pacifica(3) clique97.920.84
3264Aurantimonas ureilytica(1) singleton
2709Kribbella catacumbae(1) singleton
3826Nonomuraea coxensis(1) singleton
1171Streptomyces vitaminophilus(1) singleton
4248Sciscionella marina(1) singleton
1571Shimazuella kribbensis(1) singleton
4343Flexithrix dorotheae(1) singleton
1733Cytophaga aurantiaca(1) singleton
4776Moraxella boevrei(1) singleton
3900Streptomyces sp.(1) singleton
1192Spirosoma spitsbergense(1) singleton
3353Balneola vulgaris(1) singleton
2579Corynebacterium pilosum(1) singleton
4759Oligella ureolytica(1) singleton
2051Actinopolymorpha alba(1) singleton
4195Corynebacterium propinquum(1) singleton
4837Desulfovibrio oxyclinae(1) singleton
2154Gracilimonas tropica(1) singleton
4861Endozoicomonas elysicola(1) singleton
4874Uliginosibacterium gangwonense(1) singleton
2200Legionella shakespearei(1) singleton
1205Spirosoma panaciterrae(1) singleton
477Salinispora pacifica(12) clique97.910.83
4211Thermus igniterrae(1) singleton
4772Desulfobacter curvatus(1) singleton
1540Niabella aurantiaca(1) singleton
974Blautia producta(2) clique99.990.99
4846unclassified(1) singleton
4553Burkholderia nodosa(1) singleton
4424Wenxinia marina(1) singleton
1222Pasteurella pneumotropica(1) singleton
2262Streptococcus thoraltensis(1) singleton
3995Meganema perideroedes(1) singleton
4228Streptomyces scabrisporus(1) singleton
425Clostridium glycolicum(2) clique1000.98
3505Streptomyces sp.(1) singleton
65Streptomyces sp.(5) clique98.690.89
4632Desulfotomaculum kuznetsovii(1) singleton
4233Erysipelothrix tonsillarum(1) singleton
2044Kangiella aquimarina(1) singleton
4794Methyloversatilis universalis(1) singleton
4001Fischerella sp.(1) singleton
4506Methylobacterium sp.(1) singleton
1468Desulfonatronum lacustre(1) singleton
2342Amycolatopsis alba(1) singleton
3028Methylomonas sp.(1) singleton
3494Methylophilus sp.(1) singleton
2886Rhizobium sp.(1) singleton
1532Sediminibacterium sp.(1) singleton
3750Thioalkalivibrio thiocyanodenitrificans(1) singleton
3836Agrobacterium albertimagni(1) singleton
1234Achromobacter piechaudii(1) singleton
3418Segetibacter koreensis(1) singleton
596Streptomyces sp.(3) clique98.640.85
2471Bacillus sp.(1) singleton
4835Streptomyces purpureus(1) singleton
2628Labrys methylaminiphilus(1) singleton
674Methylotenera sp.(1) Methylotenera versatilis(1) clique1000.99
388Methylophilus sp.(2) clique1000.99
4324Paenibacillus alvei(1) singleton
3823Mycobacterium sp.(1) singleton
1188Cohnella panacarvi(1) singleton
2651Thermicanus aegyptius(1) singleton
1117Orenia marismortui(1) singleton
3699Methylosinus sp.(1) singleton
1524Paenibacillus sp.(1) singleton
4032Sphingomonas phyllosphaerae(1) singleton
2776Allobaculum stercoricanis(1) singleton
4594Janthinobacterium sp.(1) singleton
3227Nitratiruptor tergarcus(1) singleton
1723Actinopolyspora mortivallis(1) singleton
3982Methanobacterium sp.(1) singleton
1845Janthinobacterium lividum(1) singleton
397Anabaena circinalis(2) clique97.230.81
3344Indibacter alkaliphilus(1) singleton
3746Rhizobium leguminosarum(1) singleton
1529Sporichthya polymorpha(1) singleton
2846Methylopila sp.(1) singleton
361Deinococcus sp.(1) Deinococcus ficus(1) clique97.790.84
190Acetobacter aceti(2) clique1000.9
2867Rhodovibrio salinarum(1) singleton
4556Methylovulum miyakonense(1) singleton
1744Methyloferula stellata(1) singleton
3581Methylomicrobium buryatense(1) singleton
2448Haloglycomyces albus(1) singleton
914Methyloversatilis sp.(1) unclassified(1) clique1001
2229Fischerella sp.(1) singleton
824Sphingomonas melonis(3) clique99.790.9
2697Bradyrhizobium japonicum(1) singleton
4679Bacteroides propionicifaciens(1) singleton
3252Porphyromonas bennonis(1) singleton
4131Kordiimonas gwangyangensis(1) singleton
2937Acinetobacter bouvetii(1) singleton
4341Porphyromonas macacae(1) singleton
2279Frankia sp.(1) singleton
251Methanocaldococcus villosus(2) clique1000.88
1884Salisaeta longa(1) singleton
3735Geminicoccus roseus(1) singleton
1093Methylosinus sp.(1) singleton
3477Leucothrix mucor(1) singleton
1816Rudanella lutea(1) singleton
4567Saccharomonospora saliphila(1) singleton
2863Saccharomonospora halophila(1) singleton
3946Enterobacter cloacae(1) singleton
2470Synechococcus sp.(1) singleton
802Natrinema gari(1) Natrinema sp.(1) clique98.920.87
1354Melioribacter roseus(1) singleton
2795Mycoplasma wenyonii(1) singleton
47Candidatus Portiera aleyrodidarum(3) Candidatus Portiera sp.(1) clique99.950.94
4838Xanthobacter sp.(1) singleton
1445Mastigocladopsis repens(1) singleton
4016Succinispira mobilis(1) singleton
1655Methylosarcina lacus(1) singleton
4888Deferrisoma camini(1) singleton
2527Sphingomonas phyllosphaerae(1) singleton
4493Labrenzia alexandrii(1) singleton
2522Methyloversatilis sp.(1) singleton
3014Amycolatopsis benzoatilytica(1) singleton
3278Methylotenera mobilis(1) singleton
693Salinispora pacifica(2) clique99.990.97
155Natronorubrum tibetense(2) clique99.990.95
3958Paracoccus sp.(1) singleton
2387Actinopolyspora halophila(1) singleton
1993Methylocystis rosea(1) singleton
3101Rhizobium leguminosarum(1) singleton
2624Haloplanus natans(1) singleton
4022Methyloversatilis sp.(1) singleton
3325Arthrobacter sp.(1) singleton
4438Methylobacter luteus(1) singleton
3178Methylobacterium marinus(1) singleton
404Staphylococcus massiliensis(2) clique99.960.92
1911Brevibacterium casei(1) singleton
3191Methylobacterium sp.(1) singleton
2821Hoeflea sp.(1) singleton
1257Riemerella columbina(1) singleton
3371Loktanella hongkongensis(1) singleton
101Ancylobacter sp.(1) unclassified(1) clique1000.94
4746Amycolatopsis balhimycina(1) singleton
1847Loktanella sp.(1) singleton
4109Clostridium acidurici(1) singleton
1361Pseudomonas psychrophila(1) singleton
2202Methylosarcina fibrata(1) singleton
4420Thioalkalivibrio versutus(1) singleton
869Wohlfahrtiimonas chitiniclastica(2) clique97.180.88
2250Rothia mucilaginosa(1) singleton
3928Sulfurovum sp.(1) singleton
3992Methylocystis sp.(1) singleton
2247Ensifer fredii(1) singleton
1764Cyanobacterium sp.(1) singleton
1965Desulfobulbus sp.(1) singleton
2896Leptolyngbya sp.(1) singleton
4610Synechocystis sp.(1) singleton
4177Mesorhizobium loti(1) singleton
3016unclassified(1) singleton
1765unclassified(1) singleton
3522unclassified(1) singleton
4923unclassified(1) singleton
234Thioalkalivibrio sp.(11) clique97.980.89
3223unclassified(1) singleton
2466Frankia sp.(1) singleton
838Thioalkalivibrio sp.(3) clique99.60.97
854Thioalkalivibrio sp.(2) clique99.060.92
520Thioalkalivibrio sp.(12) clique98.870.91
565Thioalkalivibrio sp.(7) clique97.720.85
1795Thioalkalivibrio sp.(1) singleton
2323Bacteroides barnesiae(1) singleton
1624Ahrensia kielensis(1) singleton
3871Arthrobacter sp.(1) singleton
2528Arthrobacter sp.(1) singleton
348Arthrobacter sp.(2) clique98.610.92
3869unclassified(1) singleton
1630Chitiniphilus shinanonensis(1) singleton
2499unclassified(1) singleton
3887Acaricomes phytoseiuli(1) singleton
2910Amorphus coralli(1) singleton
4662Bacillus fordii(1) singleton
2360unclassified(1) singleton
4005Paenibacillus sanguinis(1) singleton
1377Paenibacillus terrigena(1) singleton
2284Streptomyces sp.(1) singleton
1699Verrucomicrobium sp.(1) singleton
3885Pseudomonas sp.(1) singleton
992Paenibacillus panacisoli(1) Paenibacillus massiliensis(1) clique96.510.84
1820Methylocystis sp.(1) singleton
1231Alistipes onderdonkii(1) singleton
2296Arthrobacter sp.(1) singleton
1957Corynebacterium capitovis(1) singleton
3545Rhizobium sp.(1) singleton
4728Salsuginibacillus kocurii(1) singleton
3857Halomonas zhanjiangensis(1) singleton
1194Campylobacter ureolyticus(1) singleton
584Cycloclasticus zancles(1) Cycloclasticus sp.(2) Cycloclasticus pugetii(1) clique98.750.88
2970Acinetobacter tjernbergiae(1) singleton
3943Thiomicrospira halophila(1) singleton
1697Pseudogulbenkiania sp.(1) singleton
2075Campylobacter curvus(1) singleton
4937Litoreibacter arenae(1) singleton
2047Thioalkalivibrio sp.(1) singleton
14Thioalkalivibrio sp.(11) clique97.410.87
23Thioalkalivibrio sp.(3) clique97.780.87
1017Thioalkalivibrio sp.(1) singleton
4337Thioalkalivibrio sp.(1) singleton
1737Streptomyces sp.(1) singleton
2848Thioalkalivibrio sp.(1) singleton
3666Brevibacillus laterosporus(1) singleton
1951Allofustis seminis(1) singleton
2405Salinispora pacifica(1) singleton
2734Actinokineospora enzanensis(1) singleton
1554Rhizobium sp.(1) singleton
3056Variovorax sp.(1) singleton
3919unclassified(1) singleton
999Anaeroarcus burkinensis(1) Anaeromusa acidaminophila(1) clique97.660.81
3312Brachymonas chironomi(1) singleton
1646unclassified(1) singleton
1575Shewanella amazonensis(1) singleton
1303Candidatus Nitrosopumilus koreensis(1) singleton
4544Pectobacterium carotovorum(1) singleton
2130Riemerella anatipestifer(1) singleton
3084Blattabacterium sp.(1) singleton
3773Thermococcus sp.(1) singleton
4349Enterobacter cloacae(1) singleton
371Nocardiopsis alba(2) clique98.740.9
2856Francisella noatunensis(1) singleton
4489Marinobacter sp.(1) singleton
3644Candidatus Nitrosopumilus sp.(1) singleton
1790Methanomassiliicoccus luminyensis(1) singleton
4625Azoarcus toluclasticus(1) singleton
998Desulfovibrio acrylicus(1) Desulfovibrio desulfuricans(1) clique99.10.9
4164Duganella zoogloeoides(1) singleton
2427Methylophilus methylotrophus(1) singleton
3482Spirochaeta bajacaliforniensis(1) singleton
1863Pseudomonas sp.(1) singleton
862Pseudomonas sp.(4) clique1001
772Pseudomonas sp.(7) clique99.660.96
486Pseudomonas putida(1) Pseudomonas monteilii(1) Pseudomonas sp.(12) clique99.460.94
1099Salinimonas chungwhensis(1) singleton
3151Porphyromonas gulae(1) singleton
4528Marinobacterium rhizophilum(1) singleton
2783Rubritalea marina(1) singleton
4863Saccharibacter floricola(1) singleton
1221Saccharibacillus kuerlensis(1) singleton
3441Streptococcus henryi(1) singleton
3005Streptomyces sulphureus(1) singleton
1436Halomonas lutea(1) singleton
4670Proteiniphilum acetatigenes(1) singleton
2857Psychroflexus tropicus(1) singleton
4120Thermus scotoductus(1) singleton
1891Megasphaera cerevisiae(1) singleton
903Sporolactobacillus vineae(2) clique1000.99
4257Selenomonas bovis(1) singleton
2477Zymophilus raffinosivorans(1) singleton
2914Actinomadura flavalba(1) singleton
4364Alicyclobacillus pohliae(1) singleton
3988Polynucleobacter unclassified(1) singleton
4475unclassified(1) singleton
2237Deinococcus apachensis(1) singleton
3713Henriciella marina(1) singleton
4147unclassified(1) singleton
926Bacillus cereus(2) clique99.430.93
984Bacillus cereus(2) clique99.660.94
3218Weissella confusa(1) singleton
4881Mycobacterium thermoresistibile(1) singleton
2637Bradyrhizobium sp.(1) singleton
610Simiduia agarivorans(2) clique99.990.95
1170Bdellovibrio bacteriovorus(1) singleton
3225Methanolobus psychrophilus(1) singleton
4791Exiguobacterium antarcticum(1) singleton
1139Leptospirillum ferriphilum(1) singleton
3370Thermoanaerobacterium saccharolyticum(1) singleton
4194Tistrella mobilis(1) singleton
4185Enterobacter cloacae(1) singleton
273Bacillus cereus(5) clique97.710.84
1423Mycoplasma agalactiae(1) singleton
1119Bacillus cereus(1) singleton
2920Lactobacillus parabrevis(1) singleton
4331Polaribacter franzmannii(1) singleton
1370Curvibacter lanceolatus(1) singleton
1173Streptococcus minor(1) singleton
4002Flavobacterium rivuli(1) singleton
1732Smaragdicoccus niigatensis(1) singleton
2148Methanothermococcus thermolithotrophicus(1) singleton
1251Gilvimarinus chinensis(1) singleton
2519Paenibacillus daejeonensis(1) singleton
1218Gracilibacillus lacisalsi(1) singleton
1406Caldimonas manganoxidans(1) singleton
2316Metascardovia criceti(1) singleton
4327Rudaea cellulosilytica(1) singleton
1873Microbacterium sp.(1) singleton
2979unclassified(1) singleton
1486Hirschia maritima(1) singleton
611Clostridium saccharoperbutylacetonicum(2) clique1000.97
1158Desulfovibrio africanus(1) singleton
1663Acidovorax sp.(1) singleton
2321Pseudomonas putida(1) singleton
401Dehalobacter sp.(2) clique99.790.94
1064Leuconostoc carnosum(1) singleton
1919Alicyclobacillus hesperidum(1) singleton
4114Lactobacillus florum(1) singleton
504Leptospira kirschneri(25) Leptospira santarosai(1) clique99.110.89
102Streptococcus intermedius(6) clique98.470.86
3351Arthrobacter globiformis(1) singleton
1182Gordonia araii(1) singleton
739Microbacterium sp.(1) Kocuria palustris(1) clique98.530.9
2691Caenispirillum salinarum(1) singleton
1420Bacillus alcalophilus(1) singleton
170Citrobacter sp.(2) Citrobacter freundii(3) clique98.990.88
3512Galbibacter sp.(1) singleton
1729Idiomarina xiamenensis(1) singleton
4639unclassified(1) singleton
4940Celeribacter baekdonensis(1) singleton
1581Salimicrobium sp.(1) singleton
3800Staphylococcus arlettae(1) singleton
1068Oceaniovalibus guishaninsula(1) singleton
1243Nitratireductor pacificus(1) singleton
2493Cecembia lonarensis(1) singleton
3828Aeromonas media(1) singleton
286Klebsiella sp.(1) Klebsiella oxytoca(1) clique99.340.83
2645Neisseria weaveri(1) singleton
4621Pseudomonas stutzeri(1) singleton
2378Catellicoccus marimammalium(1) singleton
642Staphylococcus equorum(1) Staphylococcus sp.(1) clique99.480.89
1450Nitratireductor indicus(1) singleton
4139Rhizobium sp.(1) singleton
2462Nitrolancetus hollandicus(1) singleton
577Pseudomonas fluorescens(1) Pseudomonas sp.(1) clique98.890.9
1142Enterobacter sp.(1) singleton
4442Thioalkalivibrio sp.(1) singleton
2334Thioalkalivibrio sp.(1) singleton
3881Variovorax paradoxus(1) singleton
2291Fusobacterium russii(1) singleton
3896Paenibacillus fonticola(1) singleton
2789Microbulbifer variabilis(1) singleton
4547Pseudomonas sp.(1) singleton
3140Novispirillum itersonii(1) singleton
4780Oceanimonas smirnovii(1) singleton
4019Salinicoccus albus(1) singleton
720Pseudoalteromonas piscicida(2) Pseudoalteromonas sp.(1) clique98.380.89
193Rhodococcus sp.(2) clique98.80.87
144Thioalkalivibrio thiocyanoxidans(1) Thioalkalivibrio sp.(2) clique99.120.95
196Thioalkalivibrio sp.(2) clique99.910.96
3135Clostridium sporosphaeroides(1) singleton
2369Nocardioides sp.(1) singleton
3570Actinomadura atramentaria(1) singleton
3189unclassified(1) singleton
3627Rhodonellum psychrophilum(1) singleton
2341Arthrobacter sp.(1) singleton
1925unclassified(1) singleton
2722Sideroxydans unclassified(1) singleton
4484Epsilonproteobacteria unclassified(1) singleton
2947Bacillus acidiproducens(1) singleton
3721Epsilonproteobacteria unclassified(1) singleton
1506Epsilonproteobacteria unclassified(1) singleton
4063Luteibacter sp.(1) singleton
1383Thioalkalivibrio sp.(1) singleton
4007Gordonia kroppenstedtii(1) singleton
3574Propionibacterium sp.(1) singleton
1440Algicola sagamiensis(1) singleton
3114Arhodomonas aquaeolei(1) singleton
4497Bacteroides gallinarum(1) singleton
2852Cohnella laeviribosi(1) singleton
4747Deinococcus aquatilis(1) singleton
2987Elioraea tepidiphila(1) singleton
3473Hahella ganghwensis(1) singleton
2468Leeia oryzae(1) singleton
1475Amphritea japonica(1) singleton
2750Brachyspira innocens(1) singleton
377Moritella marina(2) clique1000.99
2716Psychromonas ossibalaenae(1) singleton
2816Burkholderia sp.(1) singleton
2319Delftia sp.(1) singleton
2797unclassified(1) singleton
4898Methanobacterium formicicum(1) singleton
192Solibacillus silvestris(1) Bacillus isronensis(1) clique98.40.88
712Mycobacterium sp.(1) Mycobacterium fortuitum(1) clique99.990.96
4877Flavobacterium sp.(1) singleton
3149Cupriavidus necator(1) singleton
3087Pseudomonas sp.(1) singleton
2005actinobacterium sp.(1) singleton
3911Sideroxydans unclassified(1) singleton
2171Actinobacillus capsulatus(1) singleton
3009Bifidobacterium asteroides(1) singleton
2195Pseudomonas stutzeri(1) singleton
3359Pantoea sp.(1) singleton
501Bartonella doshiae(2) clique99.990.97
2057Bartonella taylorii(1) singleton
4280Bartonella alsatica(1) singleton
1579Bartonella sp.(1) singleton
658Bartonella washoensis(2) clique98.480.88
771unclassified(2) Leptospira interrogans(1) Leptospira santarosai(22) clique99.120.87
3917Helicobacter pylori(1) singleton
1875Helicobacter pylori(1) singleton
3537Helicobacter pylori(1) singleton
3257Helicobacter pylori(1) singleton
1032Helicobacter pylori(1) singleton
438Bartonella vinsonii(2) clique99.20.91
2706Bartonella melophagi(1) singleton
942Aggregatibacter actinomycetemcomitans(2) clique97.190.86
3343Agrobacterium tumefaciens(1) singleton
4431Streptococcus mitis(1) singleton
2097Helicobacter pylori(1) singleton
915Leptospira licerasiae(4) clique1000.98
2934Pontibacter sp.(1) singleton
339Bartonella birtlesii(2) clique99.660.91
672Bartonella tamiae(2) clique99.970.97
1926Rubellimicrobium thermophilum(1) singleton
278Klebsiella sp.(1) Klebsiella oxytoca(4) clique99.350.9
1373Roseobacter sp.(1) singleton
907Sporomusa ovata(2) clique99.990.96
625Agrobacterium sp.(3) clique1000.97
1241Stenotrophomonas maltophilia(1) singleton
3423Demetria terragena(1) singleton
3103Leisingera nanhaiensis(1) singleton
467Streptococcus sp.(6) clique group98.010.81
1031unclassified(1) singleton
3758Hydrocarboniphaga effusa(1) singleton
4362Nocardia sp.(1) singleton
3972Shewanella loihica(1) singleton
4376Curtobacterium sp.(1) singleton
177Microbacterium sp.(1) Microbacterium paraoxydans(1) clique98.30.8
3711Kaistia granuli(1) singleton
1114Leisingera aquimarina(1) singleton
2648Phaeobacter arcticus(1) singleton
4939Burkholderia bryophila(1) singleton
3280Streptomyces sp.(1) singleton
1038Bacillus sp.(1) singleton
3792Streptomyces sp.(1) singleton
1561Nocardia sp.(1) singleton
4316Mycobacterium sp.(1) singleton
935Methylobacterium sp.(2) clique99.270.77
1650Hymenobacter aerophilus(1) singleton
3320Kushneria aurantia(1) singleton
1147Loktanella vestfoldensis(1) singleton
1037Massilia niastensis(1) singleton
4735Pannonibacter phragmitetus(1) singleton
748Pseudomonas sp.(3) clique98.370.95
1045Streptomyces canus(1) singleton
3071Psychrobacter lutiphocae(1) singleton
1331Rheinheimera perlucida(1) singleton
3488Singularimonas variicoloris(1) singleton
1830Vitreoscilla stercoraria(1) singleton
4115Empedobacter brevis(1) singleton
306Pseudomonas sp.(3) clique99.520.96
2399Paenibacillus ginsengihumi(1) singleton
1226Colwellia piezophila(1) singleton
878Pseudomonas sp.(2) clique1001
2483Salinicoccus carnicancri(1) singleton
1946Alteromonas macleodii(1) singleton
4919unclassified(1) singleton
3128Candidatus Liberibacter crescens(1) singleton
1381Alcanivorax dieselolei(1) singleton
1071Thioalkalivibrio nitratireducens(1) singleton
1592Hyphomicrobium zavarzinii(1) singleton
3754Burkholderia cepacia(1) singleton
4260Actinobacillus suis(1) singleton
2682Myxococcus stipitatus(1) singleton
200Thermacetogenium phaeum(2) clique99.990.97
452Pseudomonas fluorescens(1) Pseudomonas sp.(2) clique99.130.89
676Enterococcus hirae(2) clique99.990.91
3442Helicobacter pylori(1) singleton
2525Pyrococcus sp.(1) singleton
4926Pseudomonas sp.(1) singleton
1735Pseudoclavibacter faecalis(1) singleton
1537Pedobacter unclassified(1) singleton
4369Pedobacter unclassified(1) singleton
2211Pedobacter unclassified(1) singleton
3074Pedobacter unclassified(1) singleton
2619Pedobacter unclassified(1) singleton
4382unclassified(1) singleton
3471unclassified(1) singleton
951Arenimonas sp.(1) Rhizobacter sp.(1) Lysobacter sp.(1) clique99.960.68
3026unclassified(1) singleton
4359unclassified(1) singleton
4503Delftia sp.(1) singleton
1401Delftia sp.(1) singleton
4433unclassified(1) singleton
4027Caulobacter vibrioides(1) singleton
3582unclassified(1) singleton
1681unclassified(1) singleton
1527Woodsholea maritima(1) singleton
3037Epsilonproteobacteria unclassified(1) singleton
4025Epsilonproteobacteria unclassified(1) singleton
4393Bordetella sp.(1) singleton
4860Robiginitomaculum antarcticum(1) singleton
2703Actinoplanes sp.(1) singleton
2355Amycolatopsis sp.(1) singleton
4108Succinimonas amylolytica(1) singleton
3807Delftia sp.(1) singleton
2135Rhodanobacter sp.(1) singleton
4943Tolumonas sp.(1) singleton
2569Colwellia sp.(1) singleton
1636Colwellia sp.(1) singleton
3400Colwellia sp.(1) singleton
1214Colwellia sp.(1) singleton
4935Colwellia sp.(1) singleton
1029Colwellia sp.(1) singleton
4729unclassified(1) singleton
2570Cycloclasticus sp.(1) singleton
3847Cycloclasticus sp.(1) singleton
1687Cycloclasticus sp.(1) singleton
1055Cycloclasticus sp.(1) singleton
3161Cycloclasticus sp.(1) singleton
1940unclassified(1) singleton
3163Cycloclasticus sp.(1) singleton
940Arthrobacter nicotinovorans(2) clique98.350.94
1680Frankia sp.(1) singleton
2372Streptomyces sp.(1) singleton
4219Streptomyces sp.(1) singleton
4617unclassified(1) singleton
2054Methylomonas sp.(1) singleton
2167unclassified(1) singleton
2686Terracoccus sp.(1) singleton
3907Salinimicrobium terrae(1) singleton
217Tetragenococcus muriaticus(2) clique99.020.84
422Clostridium stercorarium(2) clique1000.97
2152Dyadobacter beijingensis(1) singleton
210Thioalkalivibrio sp.(3) clique1000.99
1012Cryocola sp.(1) Leifsonia sp.(1) clique98.060.94
3107Candidatus Glomeribacter sp.(1) singleton
4126Geopsychrobacter electrodiphilus(1) singleton
1661unclassified(1) singleton
3822unclassified(1) singleton
1583unclassified(1) singleton
2313Coprothermobacter platensis(1) singleton
3589Delftia sp.(1) singleton
1439Nocardioides sp.(1) singleton
3598Bacillus aidingensis(1) singleton
107Lactobacillus catenaformis(1) Eggerthia catenefornis(1) clique99.120.88
2010Pseudomonas sp.(1) singleton
4223Mesorhizobium sp.(1) singleton
3425Microbacterium sp.(1) singleton
4631Mycobacterium sp.(1) singleton
3858Flavobacterium sp.(1) singleton
1145Caulobacter sp.(1) singleton
1904Thiomicrospira arctica(1) singleton
2652Bradyrhizobium sp.(1) singleton
2556Promicromonospora sukumoe(1) singleton
4516Cellulomonas sp.(1) singleton
1855Bacillus sp.(1) singleton
3540Thioalkalivibrio sp.(1) singleton
2023Solirubrobacter sp.(1) singleton
4572Granulicoccus phenolivorans(1) singleton
2905Acetobacter nitrogenifigens(1) singleton
3051Azospirillum halopraeferens(1) singleton
352Corynebacterium callunae(2) clique1000.94
2836Ferrimonas futtsuensis(1) singleton
4437Flavobacterium soli(1) singleton
2345unclassified(1) singleton
1483Mycobacterium xenopi(1) singleton
2338Mycobacterium phlei(1) singleton
3480Candidatus Endolissoclinum patella(1) singleton
4167Legionella moravica(1) singleton
2265Marinobacterium litorale(1) singleton
1722Meiothermus rufus(1) singleton
1151Pseudonocardia asaccharolytica(1) singleton
1286unclassified(1) singleton
2708unclassified(1) singleton
4903unclassified(1) singleton
4401Salinarimonas rosea(1) singleton
3059Streptococcus plurextorum(1) singleton
2235Streptomyces flavidovirens(1) singleton
3487Thermus antranikianii(1) singleton
3282unclassified(1) singleton
1186Conexibacter woesei(1) singleton
3690unclassified(1) singleton
3131Eudoraea adriatica(1) singleton
1415Weissella halotolerans(1) singleton
1578unclassified(1) singleton
2664Myroides injenensis(1) singleton
3897Marmoricola sp.(1) singleton
4853Hippea alviniae(1) singleton
3095unclassified(1) singleton
3567Veillonella magna(1) singleton
3996Algoriphagus vanfongensis(1) singleton
152Actinomyces georgiae(2) clique99.120.89
18Tannerella Human(3) clique97.210.78
4710Arenibacter certesii(1) singleton
1713Lactobacillus ceti(1) singleton
3695unclassified(1) singleton
4081Desulfovibrio cuneatus(1) singleton
73Desulfovibrio gigas(2) clique99.990.94
2882Lysobacter sp.(1) singleton
4258Desulfovibrio putealis(1) singleton
2700Sandarakinorhabdus limnophila(1) singleton
617Gordonia sp.(1) Gordonia terrae(1) clique98.440.79
2595Gordonia aichiensis(1) singleton
4089Gordonia amicalis(1) singleton
2018Gordonia effusa(1) singleton
3303Gordonia malaquae(1) singleton
2695Gordonia paraffinivorans(1) singleton
2420Gordonia rhizosphera(1) singleton
3652Gordonia rubripertincta(1) singleton
1883Gordonia sihwensis(1) singleton
3055Gordonia soli(1) singleton
3241Thalassobaculum salexigens(1) singleton
4519Nevskia ramosa(1) singleton
698Desulfotignum balticum(1) Desulfotignum phosphitoxidans(1) clique97.140.74
1781Pedobacter oryzae(1) singleton
4400Actinomyces suimastitidis(1) singleton
2190Atopobium fossor(1) singleton
2805unclassified(1) singleton
4501Desulforegula conservatrix(1) singleton
3696unclassified(1) singleton
4187Gelidibacter mesophilus(1) singleton
2443Geothrix fermentans(1) singleton
4938Mesonia mobilis(1) singleton
2140Algoriphagus terrigena(1) singleton
2960Oceanobacter kriegii(1) singleton
2680Oceanospirillum maris(1) singleton
3802Pleomorphomonas oryzae(1) singleton
1090Porphyrobacter cryptus(1) singleton
2393Propionibacterium thoenii(1) singleton
4825Propionicicella superfundia(1) singleton
1050Janthinobacterium sp.(1) singleton
4314Salipiger mucosus(1) singleton
3113Desulfospira joergensenii(1) singleton
1364unclassified(1) singleton
4053Pseudomonas sp.(1) singleton
429Streptomyces sp.(5) clique99.850.97
3234Desulfovibrio longus(1) singleton
2181Thiomonas sp.(1) singleton
3864Actinomyces vaccimaxillae(1) singleton
4201Sporosarcina ureae(1) singleton
1371Terrimonas ferruginea(1) singleton
4596Tenacibaculum ovolyticum(1) singleton
1098Actinomadura cremea(1) singleton
3334Hamadaea tsunoensis(1) singleton
1546Pseudomonas cremoricolorata(1) singleton
3918Glycomyces arizonensis(1) singleton
4136Chryseobacterium daeguense(1) singleton
2391Novosphingobium acidiphilum(1) singleton
4604Bavariicoccus seileri(1) singleton
127Desulfovibrio hydrothermalis(2) clique1000.96
1549Flexibacter roseolus(1) singleton
3736Nocardioides halotolerans(1) singleton
4422Streptococcus porci(1) singleton
1497Aliagarivorans marinus(1) singleton
4875Thermomonas fusca(1) singleton
2215Pseudomonas vranovensis(1) singleton
2621Melitea salexigens(1) singleton
4865Pseudomonas parafulva(1) singleton
3725Chryseobacterium gregarium(1) singleton
1097Jeotgalicoccus marinus(1) singleton
3368Flavobacterium frigidarium(1) singleton
1586Propionibacterium jensenii(1) singleton
4866Alicyclobacillus herbarius(1) singleton
1153Algoriphagus mannitolivorans(1) singleton
2509Thermithiobacillus tepidarius(1) singleton
631Propionimicrobium lymphophilum(2) clique980.8
2078Nesiotobacter exalbescens(1) singleton
4220Aurantimonas coralicida(1) singleton
1685Microbacterium indicum(1) singleton
3794Haliea salexigens(1) singleton
1223Pseudomonas azotifigens(1) singleton
3449Pseudomonas taiwanensis(1) singleton
4664Proteocatella sphenisci(1) singleton
3942Desulfurobacterium sp.(1) singleton
1280unclassified(1) singleton
1220Pedobacter glucosidilyticus(1) singleton
2881Flavobacterium denitrificans(1) singleton
4370Gemella cuniculi(1) singleton
2149Microbacterium luticocti(1) singleton
4908Thermodesulfatator atlanticus(1) singleton
2713Curtobacterium ginsengisoli(1) singleton
1382Oceanicaulis alexandrii(1) singleton
2699Humibacter albus(1) singleton
1819Dermatophilus congolensis(1) singleton
3079Rheinheimera baltica(1) singleton
3499Acholeplasma axanthum(1) singleton
4413Mycoplasma orale(1) singleton
4432Thermonema rossianum(1) singleton
4037Actinomyces dentalis(1) singleton
928Alloscardovia omnicolens(2) clique98.860.91
4170Aestuariimicrobium kwangyangense(1) singleton
2869Fodinicurvata sediminis(1) singleton
4579unclassified(1) singleton
2484unclassified(1) singleton
315Clostridium tyrobutyricum(4) clique99.680.93
1809Desulfobulbus mediterraneus(1) singleton
3470Flavobacterium filum(1) singleton
1314Flavobacterium gelidilacus(1) singleton
3874Lactobacillus harbinensis(1) singleton
4589Inquilinus limosus(1) singleton
4620Megamonas hypermegale(1) singleton
1913Ottowia thiooxydans(1) singleton
3207Sediminimonas qiaohouensis(1) singleton
2438Streptococcus castoreus(1) singleton
1538Ferrimonas senticii(1) singleton
2799Flavobacterium daejeonense(1) singleton
3954Bacillus gelatini(1) singleton
3293Paenibacillus harenae(1) singleton
1407Thermodesulfobacterium thermophilum(1) singleton
3643Pleomorphomonas koreensis(1) singleton
4449Aquimarina latercula(1) singleton
2340Duganella violaceinigra(1) singleton
4351Lactobacillus psittaci(1) singleton
2768Prevotella corporis(1) singleton
4527Neptunomonas japonica(1) singleton
4637Algoriphagus marincola(1) singleton
3105Prevotella timonensis(1) singleton
1988Desulfovibrio zosterae(1) singleton
1922Chryseobacterium palustre(1) singleton
3741Thermodesulfovibrio thiophilus(1) singleton
1582Halobacillus kuroshimensis(1) singleton
1109Oceanospirillum beijerinckii(1) singleton
3708Aquimarina muelleri(1) singleton
3289Ferrimonas kyonanensis(1) singleton
1227Desulfovibrio aminophilus(1) singleton
3831unclassified(1) singleton
1683unclassified(1) singleton
4603unclassified(1) singleton
2106unclassified(1) singleton
4699Marinimicrobium agarilyticum(1) singleton
2511unclassified(1) singleton
1501unclassified(1) singleton
2358Aequorivita capsosiphonis(1) singleton
2234unclassified(1) singleton
1786unclassified(1) singleton
4701unclassified(1) singleton
3057unclassified(1) singleton
4357unclassified(1) singleton
4399unclassified(1) singleton
1602unclassified(1) singleton
3883unclassified(1) singleton
1100unclassified(1) singleton
1800Paenibacillus assamensis(1) singleton
3033Paenibacillus pasadenensis(1) singleton
2913Enterorhabdus mucosicola(1) singleton
4155Paenibacillus pinihumi(1) singleton
1986Psychroserpens burtonensis(1) singleton
3692unclassified(1) singleton
3302unclassified(1) singleton
4769Shewanella frigidimarina(1) singleton
2103Shewanella denitrificans(1) singleton
4356Salinimicrobium xinjiangense(1) singleton
1692Actinomyces gerencseriae(1) singleton
3184Flavobacterium tegetincola(1) singleton
1480unclassified(1) singleton
4524unclassified(1) singleton
2255Bifidobacterium tsurumiense(1) singleton
4254Thermodesulfobacterium hveragerdense(1) singleton
2201Alicyclobacillus contaminans(1) singleton
1956Alcaligenes faecalis(1) singleton
3603Desulfatirhabdium butyrativorans(1) singleton
2773Bifidobacterium minimum(1) singleton
4525Desulfotomaculum alcoholivorax(1) singleton
2257Solirubrobacter soli(1) singleton
3990Agrococcus lahaulensis(1) singleton
4511Agromyces italicus(1) singleton
3999Tepidiphilus margaritifer(1) singleton
3782Azonexus hydrophilus(1) singleton
1239Halalkalibacillus halophilus(1) singleton
3414Pseudorhodobacter ferrugineus(1) singleton
812Lactobacillus rossiae(2) clique1000.97
2999Conchiformibius kuhniae(1) singleton
3304Desulfomicrobium escambiense(1) singleton
1121Desulfovibrio bastinii(1) singleton
3698Atopococcus tabaci(1) singleton
1021Desulfovirgula thermocuniculi(1) singleton
4494Paludibacterium yongneupense(1) singleton
3530Dyadobacter alkalitolerans(1) singleton
2971Corynebacterium massiliense(1) singleton
1309Actinomyces neuii(1) singleton
264Glaciecola pallidula(2) clique1000.97
4490Cohnella thermotolerans(1) singleton
3446unclassified(1) singleton
4684unclassified(1) singleton
2514unclassified(1) singleton
4319unclassified(1) singleton
1187unclassified(1) singleton
3834unclassified(1) singleton
3599Kineosphaera limosa(1) singleton
1901Bacillus azotoformans(1) singleton
3124Bacillus macauensis(1) singleton
2687Caloramator australicus(1) singleton
4335Agromyces subbeticus(1) singleton
3738unclassified(1) singleton
4323Lacticigenium naphtae(1) singleton
2193Pontibacillus marinus(1) singleton
1087Corynebacterium halotolerans(1) singleton
3732Rhizobium tropici(1) singleton
1330Wolbachia sp.(1) singleton
3068Clostridium celatum(1) singleton
1771Bifidobacterium magnum(1) singleton
3504Mesoflavibacter zeaxanthinifaciens(1) singleton
1340Bradyrhizobium sp.(1) singleton
3053Geobacter bremensis(1) singleton
4566Ensifer sp.(1) singleton
2394Rathayibacter toxicus(1) singleton
4143Rhizobium tropici(1) singleton
1797Bradyrhizobium sp.(1) singleton
3384Clostridium sp.(1) singleton
1351Cupriavidus sp.(1) singleton
4931Donghicola xiamenensis(1) singleton
1155Leucobacter chironomi(1) singleton
4815Streptomyces venezuelae(1) singleton
4169Amphibacillus xylanus(1) singleton
1740Desulfobacula toluolica(1) singleton
2067Chitinilyticum aquatile(1) singleton
4781Nesterenkonia alba(1) singleton
2738Arthrobacter castelli(1) singleton
4496Bradyrhizobium sp.(1) singleton
1719Bacillus kribbensis(1) singleton
3634unclassified(1) singleton
1394unclassified(1) singleton
3076unclassified(1) singleton
2158unclassified(1) singleton
4638unclassified(1) singleton
1998Epilithonimonas tenax(1) singleton
393Lactobacillus saerimneri(2) clique98.530.85
3967Ruminococcus gauvreauii(1) singleton
2275Pontibacillus halophilus(1) singleton
4498Streptomyces sp.(1) singleton
3680Luteimonas mephitis(1) singleton
3532Azospirillum irakense(1) singleton
1813Halomonas jeotgali(1) singleton
1180Ruania albidiflava(1) singleton
3937Saxeibacter lacteus(1) singleton
1777Arenimonas composti(1) singleton
2546Anaerovorax odorimutans(1) singleton
3310Arsenicicoccus bolidensis(1) singleton
2117Glaciibacter superstes(1) singleton
4231Ponticaulis koreensis(1) singleton
3034Aestuariibacter salexigens(1) singleton
4852Sulfurospirillum arcachonense(1) singleton
90Streptomyces sp.(3) clique1000.99
989Bradyrhizobium japonicum(2) clique1001
1821Desulfovibrio desulfuricans(1) singleton
2746Moraxella caprae(1) singleton
3628Streptomyces sp.(1) singleton
1387Bacteroides graminisolvens(1) singleton
2096Bacteroides pyogenes(1) singleton
4841Chitinilyticum litopenaei(1) singleton
2540Chitinimonas koreensis(1) singleton
3284Parabacteroides gordonii(1) singleton
1758Patulibacter americanus(1) singleton
944Streptomyces sp.(2) clique99.450.89
4607Streptomyces sp.(1) singleton
1451Halomonas anticariensis(1) singleton
1929Streptomyces sp.(1) singleton
3635Streptomyces sp.(1) singleton
2606unclassified(1) singleton
3960Sphingopyxis baekryungensis(1) singleton
2289Idiomarina sediminum(1) singleton
1978Marinospirillum minutulum(1) singleton
3317unclassified(1) singleton
4004Streptomyces sp.(1) singleton
2007Streptomyces sp.(1) singleton
3417Streptomyces sp.(1) singleton
4712Streptomyces sp.(1) singleton
2094Gordonia shandongensis(1) singleton
4267Marinactinospora thermotolerans(1) singleton
3821Jeotgalicoccus psychrophilus(1) singleton
4520Pseudomonas syringae(1) singleton
3744Bacillus chagannorensis(1) singleton
1149Marinococcus halotolerans(1) singleton
3341Arenibacter latericius(1) singleton
4879Flexibacter elegans(1) singleton
3693unclassified(1) singleton
1552unclassified(1) singleton
4380Streptococcus devriesei(1) singleton
3115Maritalea myrionectae(1) singleton
4868Bacillus aurantiacus(1) singleton
4707Corynebacterium freiburgense(1) singleton
3527unclassified(1) singleton
2278Eudoraea uncultured(1) singleton
3091Eudoraea uncultured(1) singleton
2826Eudoraea uncultured(1) singleton
2419Eudoraea uncultured(1) singleton
4165Eudoraea uncultured(1) singleton
2385Desulfovibrio inopinatus(1) singleton
1297Flavobacterium suncheonense(1) singleton
929Streptococcus hyovaginalis(1) Streptococcus agalactiae(1) clique96.850.75
2354Bacillus panaciterrae(1) singleton
4271unclassified(1) singleton
4068Actinoalloteichus cyanogriseus(1) singleton
2467Zooshikella ganghwensis(1) singleton
4646Globicatella sulfidifaciens(1) singleton
2900Runella zeae(1) singleton
3108Chthonomonas calidirosea(1) singleton
3457Oenococcus kitaharae(1) singleton
1779Sphingomonas jaspsi(1) singleton
1769Aerococcus urinaeequi(1) singleton
4629Nocardioides insulae(1) singleton
1474Methylohalobius crimeensis(1) singleton
4151Photobacterium halotolerans(1) singleton
2925Brevundimonas naejangsanensis(1) singleton
3749Gulosibacter molinativorax(1) singleton
4302Brevibacterium album(1) singleton
2603Nocardioides alkalitolerans(1) singleton
4902Lysobacter defluvii(1) singleton
3205Gaetbulibacter saemankumensis(1) singleton
3248Flavobacterium subsaxonicum(1) singleton
1565Methanocorpusculum bavaricum(1) singleton
1566Pseudomonas resinovorans(1) singleton
3661Saccharospirillum impatiens(1) singleton
2598Geovibrio sp.(1) singleton
3311Nisaea denitrificans(1) singleton
1413Bifidobacterium thermacidophilum(1) singleton
3097Halorubrum ezzemoulense(1) singleton
1128Gillisia sp.(1) singleton
2791Treponema bryantii(1) singleton
4751Oribacterium sp.(1) singleton
4161Bifidobacterium pseudolongum(1) singleton
2019Pseudobutyrivibrio ruminis(1) singleton
3890Selenomonas ruminantium(1) singleton
678Butyrivibrio sp.(2) clique97.610.85
1163Butyrivibrio sp.(1) singleton
207Butyrivibrio sp.(2) clique98.440.87
2266Butyrivibrio sp.(1) singleton
4059Butyrivibrio sp.(1) singleton
2661Butyrivibrio sp.(1) singleton
4479Butyrivibrio sp.(1) singleton
601Butyrivibrio sp.(2) clique98.560.85
485Butyrivibrio sp.(2) clique97.370.86
1936Butyrivibrio hungatei(1) singleton
3607Clostridium cadaveris(1) singleton
3970Clostridium clostridioforme(1) singleton
3431Clostridium paraputrificum(1) singleton
1887Dorea longicatena(1) singleton
2273unclassified(1) singleton
3564unclassified(1) singleton
4430unclassified(1) singleton
64Butyrivibrio fibrisolvens(6) clique group970.79
3619Prevotella sp.(1) singleton
2108Butyrivibrio sp.(1) singleton
1909Butyrivibrio sp.(1) singleton
2331Butyrivibrio sp.(1) singleton
4564Butyrivibrio sp.(1) singleton
3722Lachnobacterium bovis(1) singleton
4017Butyrivibrio sp.(1) singleton
4844Catellibacterium nectariphilum(1) singleton
2227Hymenobacter norwichensis(1) singleton
2933Gramella portivictoriae(1) singleton
4066Hellea balneolensis(1) singleton
1404Helcococcus sueciensis(1) singleton
3572Arenimonas oryziterrae(1) singleton
2277Streptomyces sp.(1) singleton
3597Actinobaculum schaalii(1) singleton
1874Varibaculum cambriense(1) singleton
3195Spongiibacter tropicus(1) singleton
1435Gramella echinicola(1) singleton
3538Aliagarivorans taiwanensis(1) singleton
1892Actinobaculum urinale(1) singleton
1802Comamonas composti(1) singleton
4245Leminorella grimontii(1) singleton
4741Pseudoclavibacter soli(1) singleton
3035Desulfobulbus japonicus(1) singleton
1348Microbacterium gubbeenense(1) singleton
2725Yaniella halotolerans(1) singleton
2755Pseudonocardia spinosispora(1) singleton
4894Kaistia adipata(1) singleton
1185Brevundimonas aveniformis(1) singleton
2039Jonesia quinghaiensis(1) singleton
3276unclassified(1) singleton
2503Lachnospira multipara(1) singleton
2614Propionibacterium acidifaciens(1) singleton
3430Bifidobacterium subtile(1) singleton
1316Serinicoccus marinus(1) singleton
3044Cucumibacter marinus(1) singleton
4304Aneurinibacillus terranovensis(1) singleton
2778Stappia stellulata(1) singleton
1143Vibrio litoralis(1) singleton
3070Teredinibacter sp.(1) singleton
1836Pseudobutyrivibrio ruminis(1) singleton
319Clostridium indolis(1) Clostridium methoxybenzovorans(1) Desulfotomaculum guttoideum(1) clique99.610.88
1711Chitinibacter tainanensis(1) singleton
2847Alteromonas sp.(1) singleton
2758Clostridium sp.(1) singleton
3467Streptomyces sp.(1) singleton
3118Rubritepida flocculans(1) singleton
1131Thermus islandicus(1) singleton
2366Psychrilyobacter atlanticus(1) singleton
1829Tuberibacillus calidus(1) singleton
3611Actinomyces slackii(1) singleton
3060Silanimonas lenta(1) singleton
2931Clostridium halophilum(1) singleton
4203Mycoplasma moatsii(1) singleton
2410Paracoccus zeaxanthinifaciens(1) singleton
4171Psychromonas aquimarina(1) singleton
3602Psychromonas hadalis(1) singleton
3046Aquaspirillum serpens(1) singleton
3555Butyrivibrio sp.(1) singleton
4456Pseudomonas caeni(1) singleton
2008Chryseobacterium caeni(1) singleton
3761Perlucidibaca piscinae(1) singleton
4750Paenibacillus alginolyticus(1) singleton
2370Streptococcus pleomorphus(1) singleton
2926unclassified(1) singleton
2978Paenibacillus taiwanensis(1) singleton
1212Ornithinimicrobium pekingense(1) singleton
2295Veillonella montpellierensis(1) singleton
3961Butyrivibrio sp.(1) singleton
4346Azovibrio restrictus(1) singleton
2660Dysgonomonas capnocytophagoides(1) singleton
4777Prevotella albensis(1) singleton
1140Prevotella baroniae(1) singleton
3133Thalassospira lucentensis(1) singleton
1493Spirochaeta cellobiosiphila(1) singleton
4804Bifidobacterium sp.(1) singleton
4188Gordonia hirsuta(1) singleton
3892Marinobacter daepoensis(1) singleton
4038Halomonas halocynthiae(1) singleton
531Leptospira weilii(6) unclassified(1) clique99.070.83
27Helicobacter pylori(5) clique97.740.94
166Helicobacter pylori(2) clique97.350.95
4559Helicobacter pylori(1) singleton
2866Helicobacter pylori(1) singleton
1374Helicobacter pylori(1) singleton
3956Helicobacter pylori(1) singleton
3424Sinobacter flavus(1) singleton
1991Bartonella australis(1) singleton
842Bartonella vinsonii(3) clique99.50.83
249Streptococcus sobrinus(41) clique99.020.86
4850Azohydromonas australica(1) singleton
1124Desulfobacterium anilini(1) singleton
3203Acidovorax sp.(1) singleton
1808Streptomyces sp.(1) singleton
1866unclassified(1) singleton
4012unclassified(1) singleton
4006unclassified(1) singleton
2944unclassified(1) singleton
1392unclassified(1) singleton
1834unclassified(1) singleton
4576unclassified(1) singleton
4130unclassified(1) singleton
2488unclassified(1) singleton
1791unclassified(1) singleton
3030unclassified(1) singleton
4870unclassified(1) singleton
1570unclassified(1) singleton
4667unclassified(1) singleton
1301Runella limosa(1) singleton
4649Deinococcus murrayi(1) singleton
4622Variovorax paradoxus(1) singleton
4487unclassified(1) singleton
2981unclassified(1) singleton
3729unclassified(1) singleton
2226Salinispora pacifica(1) singleton
2665Streptomyces sp.(1) singleton
2962unclassified(1) singleton
2820unclassified(1) singleton
1020unclassified(1) singleton
3813unclassified(1) singleton
4540unclassified(1) singleton
2803unclassified(1) singleton
2272unclassified(1) singleton
4580unclassified(1) singleton
1229unclassified(1) singleton
4246unclassified(1) singleton
2618unclassified(1) singleton
4807unclassified(1) singleton
2297unclassified(1) singleton
3427Psychromonas arctica(1) singleton
4761Leptotrichia trevisanii(1) singleton
2597unclassified(1) singleton
1590unclassified(1) singleton
3924Nocardia sp.(1) singleton
2026Streptococcus canis(1) singleton
2233Leptospira fainei(1) singleton
2644Porphyromonas uenonis(1) singleton
3637Comamonas badia(1) singleton
4726Methyloglobulus morosus(1) singleton
3224Bradyrhizobium japonicum(1) singleton
4733unclassified(1) singleton
4636unclassified(1) singleton
2930unclassified(1) singleton
1638Bacillus sp.(1) singleton
2891Bacillus sp.(1) singleton
4190Bacteroidetes unclassified(1) singleton
3888unclassified(1) singleton
1365Bradyrhizobium sp.(1) singleton
1160Bradyrhizobium sp.(1) singleton
711Burkholderia sp.(2) clique99.960.67
3630Burkholderia sp.(1) singleton
3156Burkholderia sp.(1) singleton
2766Burkholderia sp.(1) singleton
2308Burkholderia sp.(1) singleton
3206Burkholderia sp.(1) singleton
4619Burkholderia sp.(1) singleton
2348Burkholderia sp.(1) singleton
1617Burkholderia sp.(1) singleton
4409unclassified(1) singleton
1888unclassified(1) singleton
3529unclassified(1) singleton
1353Caulobacter sp.(1) singleton
1449Caulobacter sp.(1) singleton
3647Caulobacter sp.(1) singleton
2963unclassified(1) singleton
1283unclassified(1) singleton
1141unclassified(1) singleton
2413unclassified(1) singleton
3829unclassified(1) singleton
4030Cupriavidus sp.(1) singleton
4671Ensifer sp.(1) singleton
1955Ensifer sp.(1) singleton
2381Massilia sp.(1) singleton
1605Microlunatus sp.(1) singleton
2868unclassified(1) singleton
2851unclassified(1) singleton
3015Pelomonas sp.(1) singleton
3577unclassified(1) singleton
1772unclassified(1) singleton
1846unclassified(1) singleton
4472unclassified(1) singleton
2724unclassified(1) singleton
3120unclassified(1) singleton
1476unclassified(1) singleton
3880Rhizobium sp.(1) singleton
1755Rhizobium sp.(1) singleton
4205Rhizobium sp.(1) singleton
2113Rhizobium sp.(1) singleton
1454Rhizobium sp.(1) singleton
4410Rhizobium sp.(1) singleton
2809Rhizobium sp.(1) singleton
4467Rhizobium sp.(1) singleton
4360Rhizobium sp.(1) singleton
4688Rhizobium sp.(1) singleton
3859Rhizobium sp.(1) singleton
1618Rhizobium sp.(1) singleton
4336Rhizobium sp.(1) singleton
2041Rhizobium sp.(1) singleton
4736unclassified(1) singleton
3679unclassified(1) singleton
1460unclassified(1) singleton
3669unclassified(1) singleton
1881unclassified(1) singleton
4504Variovorax sp.(1) singleton
2811Variovorax sp.(1) singleton
3944Variovorax sp.(1) singleton
2294Variovorax sp.(1) singleton
2037Variovorax sp.(1) singleton
3493Variovorax sp.(1) singleton
3288Variovorax sp.(1) singleton
1110Variovorax sp.(1) singleton
4821Variovorax sp.(1) singleton
2654unclassified(1) singleton
4317Solimonas soli(1) singleton
1425unclassified(1) singleton
2801unclassified(1) singleton
2286unclassified(1) singleton
3952unclassified(1) singleton
3651unclassified(1) singleton
3112unclassified(1) singleton
2002unclassified(1) singleton
1198unclassified(1) singleton
4732unclassified(1) singleton
2918Paucisalibacillus globulus(1) singleton
3041unclassified(1) singleton
1288unclassified(1) singleton
2741unclassified(1) singleton
4285unclassified(1) singleton
2850unclassified(1) singleton
4149unclassified(1) singleton
2437unclassified(1) singleton
1504unclassified(1) singleton
4901unclassified(1) singleton
2677unclassified(1) singleton
3762Meiothermus taiwanensis(1) singleton
1191Arthrobacter sp.(1) singleton
4133Actinokineospora inagensis(1) singleton
3378Bacillus sp.(1) singleton
3820unclassified(1) singleton
2085unclassified(1) singleton
3295unclassified(1) singleton
2588unclassified(1) singleton
3987unclassified(1) singleton
1990unclassified(1) singleton
1472unclassified(1) singleton
3201unclassified(1) singleton
1560unclassified(1) singleton
3461Rhodococcus sp.(1) singleton
1804Derxia gummosa(1) singleton
3795Bradyrhizobium japonicum(1) singleton
3415Paenibacillus uliginis(1) singleton
4783Chryseobacterium sp.(1) singleton
1727Bacillus sp.(1) singleton
3778Bifidobacterium choerinum(1) singleton
2781Anaerococcus prevotii(1) singleton
3286Vibrio splendidus(1) singleton
3328Stenotrophomonas maltophilia(1) singleton
173Helicobacter pylori(2) clique1000.97
4348Helicobacter pylori(1) singleton
440Bacillus cereus(3) clique99.430.93
3385Staphylococcus epidermidis(1) singleton
4183Haemophilus haemolyticus(1) singleton
2865Haemophilus haemolyticus(1) singleton
4405Capnocytophaga sp.(1) singleton
2194Capnocytophaga sp.(1) singleton
2893Leptospira weilii(1) singleton
1230Providencia burhodogranariea(1) singleton
2888Streptococcus parasanguinis(1) singleton
1484Streptococcus oralis(1) singleton
4500Streptococcus mitis(1) singleton
4585Aeromonas veronii(1) singleton
284Aeromonas sp.(1) Aeromonas hydrophila(7) clique97.580.9
4276Thalassospira profundimaris(1) singleton
1658Streptomyces tsukubaensis(1) singleton
2620Barnesiella intestinihominis(1) singleton
3338Slackia piriformis(1) singleton
1310Rhizobium leguminosarum(1) singleton
1738unclassified(1) singleton
3429Streptococcus oralis(1) singleton
3877Comamonas testosteroni(1) singleton
1175Anoxybacillus flavithermus(1) singleton
3566Natrinema pallidum(1) singleton
1842Natronolimnobius innermongolicus(1) singleton
3008Actinobaculum massiliae(1) singleton
1318Helicobacter pylori(1) singleton
3506Helicobacter pylori(1) singleton
1910Helicobacter pylori(1) singleton
1976Helicobacter pylori(1) singleton
4867Achromobacter xylosoxidans(1) singleton
363Streptococcus sanguinis(3) clique99.990.98
820Xanthomonas translucens(3) clique97.050.8
646Halobiforma lacisalsi(2) clique99.990.95
590Serratia marcescens(2) Serratia sp.(3) clique98.050.89
4334Helicobacter pylori(1) singleton
19Salmonella enterica(2) clique99.570.87
609Streptococcus iniae(4) clique99.960.89
2792Gardnerella vaginalis(1) singleton
2538Leptospira terpstrae(1) singleton
3950Cesiribacter andamanensis(1) singleton
58Bartonella rattimassiliensis(2) clique99.950.94
289Bartonella elizabethae(3) clique99.770.96
3197Pseudomonas stutzeri(1) singleton
2902Stenotrophomonas maltophilia(1) singleton
110Bacteroides sp.(1) Bacteroides nordii(1) clique97.990.74
415Propionibacterium acnes(4) clique99.970.96
3998Rhodococcus ruber(1) singleton
38Vibrio harveyi(3) Vibrio cholerae(1) clique98.830.84
1040Pseudomonas putida(1) singleton
3616Formosa sp.(1) singleton
2762Congregibacter litoralis(1) singleton
4150Leptospira wolbachii(1) singleton
3556Thiovulum sp.(1) singleton
1270Alishewanella aestuarii(1) singleton
3024Oceanibaculum indicum(1) singleton
4793Mycoplasma flocculare(1) singleton
332Pseudomonas syringae(1) Pseudomonas fragi(1) clique99.420.93
2221Leuconostoc pseudomesenteroides(1) singleton
502Leptospira interrogans(2) Leptospira noguchii(7) clique98.230.85
3372Pseudomonas sp.(1) singleton
1702Pseudomonas stutzeri(1) singleton
3Escherichia sp.(2) Escherichia coli(4) clique98.670.85
1086Streptomyces zinciresistens(1) singleton
3659unclassified(1) singleton
2421Glaciecola polaris(1) singleton
1964Glaciecola mesophila(1) singleton
3621Glaciecola arctica(1) singleton
2271Glaciecola lipolytica(1) singleton
2178Methylobacterium mesophilicum(1) singleton
649Thauera sp.(2) clique98.850.8
2513Thauera sp.(1) singleton
4129Pseudomonas pseudoalcaligenes(1) singleton
3031Fulvivirga imtechensis(1) singleton
1444Alcanivorax hongdengensis(1) singleton
366Bacteroides salyersiae(2) clique99.250.83
3688Natrialba hulunbeirensis(1) singleton
1116Natrialba aegyptia(1) singleton
1284Selenomonas sp.(1) singleton
1858Thauera phenylacetica(1) singleton
3403Thauera linaloolentis(1) singleton
4287Mycoplasma arginini(1) singleton
2368Myxococcus sp.(1) singleton
4642Mycoplasma alkalescens(1) singleton
4041Massilia timonae(1) singleton
2782Facklamia ignava(1) singleton
684Facklamia hominis(2) clique97.780.87
1673Atopobium minutum(1) singleton
4277Arthrobacter sp.(1) singleton
398Enterobacter sp.(2) clique97.320.8
640Acinetobacter sp.(1) Acinetobacter schindleri(1) clique96.880.79
2906Serratia sp.(1) singleton
1329Lactococcus garvieae(1) singleton
2357Selenomonas sp.(1) singleton
4097Selenomonas sp.(1) singleton
4212Acinetobacter baumannii(1) singleton
3435Acinetobacter baumannii(1) singleton
714Raoultella ornithinolytica(1) Klebsiella oxytoca(1) clique99.540.88
2690Phaeospirillum molischianum(1) singleton
4628Desulfotomaculum hydrothermale(1) singleton
2743Janibacter hoylei(1) singleton
4446Streptococcus sp.(1) singleton
2769Streptococcus sp.(1) singleton
4531unclassified(1) singleton
2807Rheinheimera nanhaiensis(1) singleton
4181Haemophilus haemolyticus(1) singleton
2063Haemophilus paraphrohaemolyticus(1) singleton
4526Sulfuricella denitrificans(1) singleton
1072Halosimplex carlsbadense(1) singleton
1717Psychroflexus gondwanensis(1) singleton
692Geobacillus caldoxylosilyticus(1) Anoxybacillus sp.(1) clique98.720.8
574Cronobacter dublinensis(4) clique98.110.89
2878Streptomyces viridochromogenes(1) singleton
2951Mycoplasma sp.(1) singleton
4648Weissella ceti(1) singleton
1833Halobacillus sp.(1) singleton
3497Enterovibrio sp.(1) singleton
2344Veillonella parvula(1) singleton
233Acinetobacter sp.(1) Acinetobacter venetianus(2) clique97.080.81
74Microbacterium sp.(1) Microbacterium laevaniformans(1) clique97.950.8
1620Streptomyces auratus(1) singleton
4473Actinomyces naeslundii(1) singleton
1968Streptococcus oralis(1) singleton
4018Rhodopirellula maiorica(1) singleton
3846Streptococcus tigurinus(1) singleton
3345Streptococcus sanguinis(1) singleton
1678Streptococcus sanguinis(1) singleton
2626Streptococcus sanguinis(1) singleton
571Streptococcus sanguinis(5) clique group97.240.92
3815Streptococcus sanguinis(1) singleton
1580Streptococcus sanguinis(1) singleton
3235Streptococcus sanguinis(1) singleton
1061Streptococcus sanguinis(1) singleton
4352Rhodopirellula europaea(1) singleton
1448Rhodopirellula europaea(1) singleton
3210Propionibacterium acnes(1) singleton
3536Bacillus cereus(1) singleton
3196Sutterella wadsworthensis(1) singleton
4510Acinetobacter sp.(1) singleton
2717Acinetobacter sp.(1) singleton
4361Acinetobacter sp.(1) singleton
905Morganella morganii(2) clique98.530.85
1030Nitrospina gracilis(1) singleton
79Leptospira meyeri(2) clique98.780.92
2253Enterobacter radicincitans(1) singleton
3997Burkholderia sp.(1) singleton
5Achromobacter xylosoxidans(2) clique98.550.81
4308Helicobacter pylori(1) singleton
1168Acidocella sp.(1) singleton
2062Brevundimonas diminuta(1) singleton
3354Micromonospora lupini(1) singleton
2600Serratia sp.(1) singleton
2940Helicobacter pylori(1) singleton
3314Rhodopirellula sp.(1) singleton
2423Bacillus methanolicus(1) singleton
1000Cronobacter universalis(2) clique99.940.76
2630Imtechella halotolerans(1) singleton
656Bordetella holmesii(3) clique99.990.9
2594Aeromonas molluscorum(1) singleton
2574Aeromonas diversa(1) singleton
3469Bacillus sp.(1) singleton
3608Bacillus methanolicus(1) singleton
3742Campylobacter showae(1) singleton
4338Pseudoalteromonas sp.(1) singleton
1085Cronobacter condimenti(1) singleton
904Streptococcus ratti(2) clique99.990.98
3152Rhizobium sp.(1) singleton
2014Helicobacter pylori(1) singleton
2876Rhizobium sp.(1) singleton
426Haemophilus parainfluenzae(2) clique98.690.94
4702Haemophilus haemolyticus(1) singleton
2694Haemophilus haemolyticus(1) singleton
3245Porphyromonas sp.(1) singleton
4833Veillonella ratti(1) singleton
4818Bacteroides oleiciplenus(1) singleton
9Klebsiella pneumoniae(2) clique99.140.86
4573Haloterrigena thermotolerans(1) singleton
2895Haloarcula japonica(1) singleton
1299unclassified(1) singleton
4539Brachyspira hampsonii(1) singleton
2977Xanthomonas fragariae(1) singleton
2458Mycobacterium vaccae(1) singleton
1930Thalassospira xiamenensis(1) singleton
4206Streptococcus infantis(1) singleton
1465Streptococcus mitis(1) singleton
1778Streptococcus infantis(1) singleton
4153Streptococcus mitis(1) singleton
2322Streptococcus mitis(1) singleton
1328Actinomyces neuii(1) singleton
4533Actinomyces turicensis(1) singleton
374Acinetobacter calcoaceticus(2) clique97.140.91
1669Acinetobacter johnsonii(1) singleton
2011Acinetobacter lwoffii(1) singleton
2203Ralstonia sp.(1) singleton
3980Streptomyces coelicoflavus(1) singleton
2507Helicobacter pylori(1) singleton
3863Helicobacter pylori(1) singleton
1623Streptococcus oralis(1) singleton
3860Streptococcus oralis(1) singleton
1632Streptococcus oralis(1) singleton
376Bacillus pumilus(2) Bacillus aerophilus(1) Bacillus stratosphericus(1) clique98.530.91
3934Halorubrum lipolyticum(1) singleton
24Bacillus subtilis(2) clique98.560.89
2165Actinomyces cardiffensis(1) singleton
2593Campylobacter concisus(1) singleton
731Streptococcus constellatus(1) Streptococcus intermedius(1) clique97.450.83
2890Planococcus antarcticus(1) singleton
4558Rothia mucilaginosa(1) singleton
2095Alishewanella agri(1) singleton
701Burkholderia sp.(1) Burkholderia terrae(1) clique98.370.81
3489Helicobacter pylori(1) singleton
3194Bartonella bovis(1) singleton
1315Parabacteroides goldsteinii(1) singleton
4048Clostridium colicanis(1) singleton
4891Clostridium hathewayi(1) singleton
958Lactobacillus equicursoris(1) Lactobacillus sp.(1) clique98.450.76
4542Rhodovulum sp.(1) singleton
2609Yokenella regensburgei(1) singleton
1154Glaciecola punicea(1) singleton
3728Mycoplasma yeatsii(1) singleton
3993Leptospira wolffii(1) singleton
2596Lactobacillus curvatus(1) singleton
3375Candidatus Glomeribacter gigasporarum(1) singleton
3830Pseudomonas pseudoalcaligenes(1) singleton
4240Desulfovibrio magneticus(1) singleton
4208Leptospira weilii(1) singleton
3587Mycoplasma salivarium(1) singleton
2274Clostridium saccharobutylicum(1) singleton
2997Acholeplasma multilocale(1) singleton
3720Agrobacterium tumefaciens(1) singleton
245Acinetobacter johnsonii(3) clique99.990.98
2936Pelosinus fermentans(1) singleton
4779Agrobacterium sp.(1) singleton
1181Leptospira vanthielii(1) singleton
4862Moraxella macacae(1) singleton
1995Arthrobacter crystallopoietes(1) singleton
171Leptospira borgpetersenii(2) clique99.670.91
4774Mogibacterium sp.(1) singleton
3180Streptococcus sp.(1) singleton
677Streptococcus sp.(1) Streptococcus oralis(1) clique97.550.96
380Capnocytophaga sp.(1) Capnocytophaga granulosa(1) clique96.730.81
4532Selenomonas sp.(1) singleton
4451Mycoplasma bovigenitalium(1) singleton
4160Helicobacter pylori(1) singleton
2736Helicobacter pylori(1) singleton
1652Porphyromonas catoniae(1) singleton
3186Pectobacterium wasabiae(1) singleton
2121Butyricicoccus pullicaecorum(1) singleton
3854unclassified(1)